Entry information : CruPrx11
Entry ID 7401
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-01 (Catherine Mathe)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-06-02 (Christophe Dunand)
Peroxidase information: CruPrx11
Name CruPrx11
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue type Ovule
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx11
start..stop
S start..stop
CmichPrx08 187 1e-60 12..111 236..335
GbPrx38 160 3e-50 1..111 231..342
PabPrx128 138 3e-42 1..110 158..260
CmichPrx04 137 3e-41 1..111 197..308
Literature and cross-references CruPrx11
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Cycas sporophyll (w/o ovule) (NYBG)
EST ref. GenBank:   EX926195.1 [3' end]
Protein sequence: CruPrx11
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   111
PWM (Da):   %s   12455.34  
PI (pH):   %s   9.4
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

DKFYAVKLKQ RCRSLADNTT IVEMDPGSFL TFDIDYYSNL KKGRGLFQSD AVLLTDREAK EYVYQEVAGA FLESIGRFYG NFKKSVEKMG RIGVLSGSSG QIRRHCAFVN T 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. 5'end is missing. Frame:-2[2-337] on contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGACCCTTT AGAATTCGGC AGAGGACTAG TCTCAGTTTT TTTTTTTTTT TTTTGTTAAT AGCATGCACA ATACAAAATT TAAGTTGTAT TTCCAACAAT GCAACGGACA TTCATTGCAA  AATTTAAACT CTAATTCCAG CAATCGGACT TGTCTCAAAC ATGCCATCGG TATTACATAT TTTTAGAACA AAAGGATCCT TCTCATGGAA AGTCCTATTG TCATCTCCTC AAACGCTCTT  ATTGACTCAC AATCATATCA GTTAAATCTA CAAGACCACA CGCATGAATT CTAATGTCTG ATCACGTCTT CAGGTGTTCA CAAAAGCGCA ATGTCGCCTG ATCTGGCCAG AGCTCCCACT  GAGAACTCCG ATTCTACCCA TTTTCTCCAC AGATTTTTTG AAGTTCCCAT AAAAACGGCC AATCGATTCC AGAAAAGCCC CGGCCACCTC CTGATACACA TATTCTTTGG CCTCACGATC  CGTGAGAAGC ACTGCATCCG ACTGGAAAAG ACCCCTTCCT TTCTTCAAAT TACTGTAATA GTCGATATCA AATGTTAAGA AGCTACCGGG ATCCATTTCC ACTATGGTGG TATTGTCTGC 
CAGACTCCTG CACCTTTGCT TCAGCTTAAC TGCGTAAAAT TTGTCC 

Retrieve as FASTA