Entry information : CruPrx12
Entry ID 7418
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-03 (Catherine Mathe)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-06-04 (Christophe Dunand)
Peroxidase information: CruPrx12
Name CruPrx12
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue type Ovule
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx12
start..stop
S start..stop
GbPrx67 335 1e-116 1..208 1..206
GbPrx02 332 2e-115 1..208 1..206
GbPrx68 329 2e-114 1..208 1..206
GbPrx71 299 3e-102 7..208 41..238
Literature and cross-references CruPrx12
Literature Brenner,E.D., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija ,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Cycas ovule (NYBG)
EST ref. GenBank:   EX917791.1 [5' end]
Protein sequence: CruPrx12
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   208 (188)
PWM (Da):   %s   22451.51 (20199.4)  
PI (pH):   %s   5.82 (5.82) Peptide Signal:   %s   cut: 21 range:21-208
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDNRIITTVC VFLCAWVICA KEFSVYDGED DDINALPQPV EGLSWKFYRK SCPKLESIVN KRIEFYLKKD ITQAAGLLTV HFHDCFVQGC DASVLLDGST TGPGEQEAPP NLTLRAKAFQ 
IINDIKETVE AACKNTVSCA DILALAARES VRKAGGPKYK VPLGRRDGLN FANESVTLAN LPPPTSNVTG LMSVLGPKGF TLTDLVAL 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. Frame:2[38-663] on contig. Missing 3'end.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGATCCAAA GCGTAAGGTA TCTGTGAATC TGTGGTAATG GATAACCGCA TAATCACTAC CGTATGTGTT TTTCTGTGTG CCTGGGTGAT CTGTGCTAAA GAATTTTCTG TATACGATGG  CGAGGATGAT GATATAAACG CACTCCCACA ACCGGTGGAA GGCCTTTCAT GGAAATTCTA CAGGAAGAGC TGCCCAAAGT TGGAGTCGAT AGTGAACAAA CGTATCGAGT TTTATTTGAA  AAAAGATATC ACGCAAGCGG CGGGCTTGCT CACGGTTCAC TTCCACGACT GTTTCGTGCA GGGTTGCGAC GCCTCGGTGT TGCTTGACGG ATCCACAACC GGGCCTGGTG AGCAGGAAGC  TCCCCCAAAC TTGACGCTCA GAGCGAAGGC ATTTCAGATC ATCAACGATA TCAAAGAGAC AGTCGAAGCC GCTTGCAAGA ATACTGTGTC CTGCGCAGAT ATCTTGGCTC TAGCTGCTCG  CGAATCCGTC AGGAAGGCTG GAGGACCCAA GTATAAAGTA CCGTTGGGGC GCAGGGATGG CCTGAACTTT GCAAATGAAT CCGTCACTCT TGCCAACTTA CCCCCGCCAA CGTCCAACGT 
TACGGGGCTT ATGAGCGTTT TGGGTCCCAA GGGATTTACT CTGACGGATC TCGTGGCACT G 

Retrieve as FASTA