Entry information : PpaGPx04
Entry ID 7432
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: PpaGPx04
Name PpaGPx04
Class Plant glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaGPx04
start..stop
S start..stop
PpaGPx02 234 2e-80 21..177 16..172
PpaGPx01 228 5e-78 21..177 11..168
PtaGPx06-2 221 6e-75 21..177 12..167
MpGPx02 224 9e-75 9..177 100..268
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 44730..45263 534  
complement(join(44730..45263))


exon

Literature and cross-references PpaGPx04
DNA ref. Phytozome 11:   scaffold_297 (45263..44730)
Protein sequence: PpaGPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   177
PWM (Da):   %s   19840.18  
PI (pH):   %s   5.32
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTDEGEVIAE GKAKAPLEPP IYDFVVKDLS GEDFQLSVYK GKVLLIVNVA SLCGLTTQHY TELTELHTKY REKGLEILAF PCNQFGRLEQ GDNEQIKEFV TTKFQAEFPV FDKVHVNGPQ 
ELPLFKYLKS QKGCGVLGDS IKWNFTKFLV DKSGNVFQRY APTIPPSKIE NDIQSCL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGGACG AAGGTGAAGT AATTGCTGAA GGCAAGGCTA AGGCACCGCT CGAGCCTCCC ATATACGACT TCGTTGTGAA GGACTTGAGC GGCGAAGACT TTCAGTTGAG CGTGTACAAG  GGGAAGGTTC TGCTCATTGT CAATGTCGCG TCCCTGTGCG GGTTGACGAC CCAACACTAC ACAGAGCTCA CAGAACTCCA CACCAAGTAC AGAGAAAAAG GTTTGGAGAT TCTGGCATTT  CCTTGCAACC AATTCGGACG GTTGGAGCAA GGGGACAACG AACAGATCAA GGAATTTGTT ACTACGAAAT TTCAGGCTGA GTTCCCCGTC TTTGACAAGG TCCATGTGAA TGGTCCTCAG  GAGTTACCGC TGTTCAAGTA CCTGAAATCG CAGAAGGGAT GCGGCGTGTT GGGCGACAGC ATCAAGTGGA ATTTCACCAA ATTCCTCGTC GACAAGAGCG GTAATGTGTT TCAACGCTAC 
GCTCCCACCA TTCCTCCTTC CAAGATAGAA AATGACATTC AATCATGTTT GTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGGACG AAGGTGAAGT AATTGCTGAA GGCAAGGCTA AGGCACCGCT CGAGCCTCCC ATATACGACT TCGTTGTGAA GGACTTGAGC GGCGAAGACT TTCAGTTGAG CGTGTACAAG  GGGAAGGTTC TGCTCATTGT CAATGTCGCG TCCCTGTGCG GGTTGACGAC CCAACACTAC ACAGAGCTCA CAGAACTCCA CACCAAGTAC AGAGAAAAAG GTTTGGAGAT TCTGGCATTT  CCTTGCAACC AATTCGGACG GTTGGAGCAA GGGGACAACG AACAGATCAA GGAATTTGTT ACTACGAAAT TTCAGGCTGA GTTCCCCGTC TTTGACAAGG TCCATGTGAA TGGTCCTCAG  GAGTTACCGC TGTTCAAGTA CCTGAAATCG CAGAAGGGAT GCGGCGTGTT GGGCGACAGC ATCAAGTGGA ATTTCACCAA ATTCCTCGTC GACAAGAGCG GTAATGTGTT TCAACGCTAC 
GCTCCCACCA TTCCTCCTTC CAAGATAGAA AATGACATTC AATCATGTTT GTAA 

Retrieve as FASTA