Entry information : AlyPrx63
Entry ID 7481
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyPrx63
Name AlyPrx63
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyPrx63
start..stop
S start..stop
AtPrx63 624 0 1..328 1..328
BstrPrx39 615 0 1..328 1..327
CrubPrx80 613 0 1..328 1..328
CagraPrx18 612 0 1..328 1..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22563751..22564737 987  
join(22563751..22564737)


exon

Literature and cross-references AlyPrx63
DNA ref. Phytozome 12:   scaffold_7 (22563751..22564737)
Protein sequence: AlyPrx63
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (301)
PWM (Da):   %s   36049.17 (33061.7)  
PI (pH):   %s   7.95 (8.21) Peptide Signal:   %s   cut: 28 range:28-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAEQSQFNNL TLTIIILCFS FQSLSSAAES HLTVDFYSKS CPNFLDIIRE TITNKQISTP TTAAAALRLF FHDCFPNGCD ASVLVSSTAF NTAERDSSIN LSLPGDGFDV VIRAKTALEL  ACPNTVSCSD IIAAAVRDLL VTVGGPYYEI SLGRRDSRVS KSSLVSDLLP LPSMQISKLI DQFSSRGFSV QEMVALSGAH TIGFSHCKEF TNRVNPNNST GYNPRFAVAL KKACLNYRND 
PTISVFNDVM TPNKFDNMYF QNIPKGLGLL ESDHGLFSDP RTRPFVELYA RDQARFFKDF AGAMQKLSLH GVLTGRRGEI RRRCDAIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAAC AATCTCAATT CAATAATCTC ACCCTCACCA TCATCATCCT CTGCTTCTCC TTCCAATCAC TATCCTCCGC CGCTGAATCT CACCTCACCG TCGATTTCTA CTCCAAATCT  TGCCCTAATT TCCTCGACAT TATCCGCGAA ACCATCACCA ACAAACAGAT CTCAACTCCA ACAACCGCCG CCGCAGCTCT CCGCCTCTTC TTCCACGACT GCTTCCCTAA CGGCTGCGAC  GCCTCCGTCC TCGTTTCCTC AACCGCTTTC AACACCGCAG AACGCGATTC ATCAATCAAT CTCTCTCTCC CCGGCGACGG ATTCGACGTC GTAATCCGAG CTAAAACAGC TCTAGAACTC  GCTTGTCCCA ACACAGTCTC TTGCTCCGAT ATCATCGCCG CCGCGGTACG AGATCTCCTC GTAACCGTCG GTGGTCCTTA CTACGAAATC TCCCTCGGCC GTCGCGATTC TCGTGTCTCG  AAATCGTCTC TCGTCTCCGA TCTCCTCCCA CTTCCATCGA TGCAGATCTC GAAGCTCATC GATCAATTCA GCTCCAGAGG CTTCTCCGTT CAAGAAATGG TTGCTTTGAG CGGTGCTCAC  ACCATCGGAT TCTCACATTG CAAAGAGTTC ACTAACCGGG TCAACCCGAA TAATAGTACC GGGTATAACC CGAGATTCGC GGTAGCTTTA AAGAAAGCTT GTTTGAATTA CAGAAATGAC  CCTACGATCT CTGTCTTCAA CGACGTGATG ACTCCAAACA AATTCGATAA TATGTATTTC CAGAATATTC CGAAAGGTCT CGGGTTACTT GAATCGGATC ACGGGTTATT CTCCGACCCG  AGAACCCGTC CGTTTGTTGA GTTATACGCG AGAGACCAAG CTCGATTCTT TAAAGACTTC GCCGGAGCTA TGCAGAAGTT GAGTCTTCAC GGTGTTTTGA CCGGACGGCG AGGAGAGATC 
CGACGAAGGT GTGATGCGAT CAACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAAC AATCTCAATT CAATAATCTC ACCCTCACCA TCATCATCCT CTGCTTCTCC TTCCAATCAC TATCCTCCGC CGCTGAATCT CACCTCACCG TCGATTTCTA CTCCAAATCT  TGCCCTAATT TCCTCGACAT TATCCGCGAA ACCATCACCA ACAAACAGAT CTCAACTCCA ACAACCGCCG CCGCAGCTCT CCGCCTCTTC TTCCACGACT GCTTCCCTAA CGGCTGCGAC  GCCTCCGTCC TCGTTTCCTC AACCGCTTTC AACACCGCAG AACGCGATTC ATCAATCAAT CTCTCTCTCC CCGGCGACGG ATTCGACGTC GTAATCCGAG CTAAAACAGC TCTAGAACTC  GCTTGTCCCA ACACAGTCTC TTGCTCCGAT ATCATCGCCG CCGCGGTACG AGATCTCCTC GTAACCGTCG GTGGTCCTTA CTACGAAATC TCCCTCGGCC GTCGCGATTC TCGTGTCTCG  AAATCGTCTC TCGTCTCCGA TCTCCTCCCA CTTCCATCGA TGCAGATCTC GAAGCTCATC GATCAATTCA GCTCCAGAGG CTTCTCCGTT CAAGAAATGG TTGCTTTGAG CGGTGCTCAC  ACCATCGGAT TCTCACATTG CAAAGAGTTC ACTAACCGGG TCAACCCGAA TAATAGTACC GGGTATAACC CGAGATTCGC GGTAGCTTTA AAGAAAGCTT GTTTGAATTA CAGAAATGAC  CCTACGATCT CTGTCTTCAA CGACGTGATG ACTCCAAACA AATTCGATAA TATGTATTTC CAGAATATTC CGAAAGGTCT CGGGTTACTT GAATCGGATC ACGGGTTATT CTCCGACCCG  AGAACCCGTC CGTTTGTTGA GTTATACGCG AGAGACCAAG CTCGATTCTT TAAAGACTTC GCCGGAGCTA TGCAGAAGTT GAGTCTTCAC GGTGTTTTGA CCGGACGGCG AGGAGAGATC 
CGACGAAGGT GTGATGCGAT CAACTAA 

Retrieve as FASTA