Entry information : Ab1CysPrx_bisporus
Entry ID 7587
Creation 2010-08-16 (Christophe Dunand)
Last sequence changes 2012-04-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-10 (Christophe Dunand)
Peroxidase information: Ab1CysPrx_bisporus
Name Ab1CysPrx_bisporus
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Agaricaceae Agaricus
Organism Agaricus bisporus    [TaxId: 5341 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ab1CysPrx_bisporus
start..stop
S start..stop
Pc1CysPrx01 385 1e-138 1..221 1..221
Lbi1CysPrx 384 4e-138 1..221 1..221
Athi1CysPrx01 384 8e-138 1..221 1..221
Pcar1CysPrx01 384 8e-138 1..221 1..221
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 813356..813451 96 N° 2 813500..813706 207 N° 3 813757..813849 93 N° 4 813903..814008 106
N° 5 814116..814246 131 N° 6 814307..814339 33  
join(813356..813451,813500..813706,813757..813849,813903..814008,814116..814246, 814307..814339)


exon

Literature and cross-references Ab1CysPrx_bisporus
DNA ref. JGI genome:   scaffold_4 (813356..814339)
Protein sequence: Ab1CysPrx_bisporus
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221
PWM (Da):   %s   24902.8  
PI (pH):   %s   6.61
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPSLRLGDTAPDFEAETTTGNIKFHEWIGNSWAILFSHPGDFTPVCTTELGEVARRAPDFQKRDVKLIGISANGLEDHHAWVKDINEYGSKFGHTDVRFPIIADGDRKISTLYDMLDYQDATNRDAKGLPFTIRTVFVIDPKKTIRLMIAYPASTGRNFDEIIRYVLSLQLGDKHRITTPVNWNKGDDVIVHPSVTSEEAKVLFPEHTVHPYLRTTPLKV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTCCCTTCGCCTAGGTGATACCGCCCCCGACTTTGAAGCTGAAACTACCACAGGAAATATCAAGTTCCATGAGTGGATTGGCAACTCTTGGGTGGGTCTTTGTTGAATGACTAGG
GTCTTGACGCTAAATATGACAAAGGCAATCCTCTTTTCCCATCCGGGAGATTTCACTCCGGTTTGTACCACCGAGCTGGGTGAGGTCGCTCGTCGTGCCCCTGACTTCCAAAAACGGGAC
GTCAAGCTCATTGGTATTTCTGCCAATGGCCTTGAAGACCACCATGCGTGGGTGAAGGATATCAATGAGTATGGCTCCAAATTCGGTCACACAGACGTCCGATTCCCCATC
GTATGTGCT
TTAAGCATACTTTCTAGGGCATTAGACTTTCCGTTTCACAGATTGCGGATGGCGATAGGAAAATTTCCACCTTGTATGACATGTTGGATTATCAGGATGCCACCAATAGGGACGCCAAGG
GCCTCCCCTTCACT
GTGAATTCATCTGTCATCTACAAGTTGACGATTAGCTCATGCATCTATACCAGATCCGTACCGTCTTTGTGATCGATCCGAAGAAGACTATTCGCCTGATGATCGC
GTACCCCGCTTCAACTGGACGCAACTTTGATGAAATTATCCGGTATGTGCTCT
TTGTTAGATTTCGTGGAAGCGTGGCTGACTGGACGGATAAAGCGTTGTAGACTGTAAGCGACTTAAC
CCATGATTTAGGTCGGGTGCTTAACTGATCCCATAATCAGCCTTGCAACTCGGTGACAAACACCGTATAACCACCCCCGTCAACTGGAATAAAGGTGATGATGTTATTGTACACCCGAGT
GTGACCTCCGAAGAGGCCAAGGTCCTGTTCCCCGAGCACACCGTCCACAAG
GTTAGTCACCGCGTCTCTTCGGACACAATATCATAGAGACTAATGAGCATTCTGTATTAGCCTTACCTC
AGGACCACGCCTCTGAAGGTATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTCCCTTCGCCTAGGTGATACCGCCCCCGACTTTGAAGCTGAAACTACCACAGGAAATATCAAGTTCCATGAGTGGATTGGCAACTCTTGGGCAATCCTCTTTTCCCATCCGGGA
GATTTCACTCCGGTTTGTACCACCGAGCTGGGTGAGGTCGCTCGTCGTGCCCCTGACTTCCAAAAACGGGACGTCAAGCTCATTGGTATTTCTGCCAATGGCCTTGAAGACCACCATGCG
TGGGTGAAGGATATCAATGAGTATGGCTCCAAATTCGGTCACACAGACGTCCGATTCCCCATC
ATTGCGGATGGCGATAGGAAAATTTCCACCTTGTATGACATGTTGGATTATCAGGAT
GCCACCAATAGGGACGCCAAGGGCCTCCCCTTCACT
ATCCGTACCGTCTTTGTGATCGATCCGAAGAAGACTATTCGCCTGATGATCGCGTACCCCGCTTCAACTGGACGCAACTTTGAT
GAAATTATCCGGTATGTGCTCT
CCTTGCAACTCGGTGACAAACACCGTATAACCACCCCCGTCAACTGGAATAAAGGTGATGATGTTATTGTACACCCGAGTGTGACCTCCGAAGAGGCC
AAGGTCCTGTTCCCCGAGCACACCGTCCACAAG
CCTTACCTCAGGACCACGCCTCTGAAGGTATAA

Retrieve as FASTA