Entry information : CcolRboh (Ccrboh)
Entry ID 7627
Creation 2010-10-06 (Christophe Dunand)
Last sequence changes 2010-10-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-10-06 (Christophe Dunand)
Peroxidase information: CcolRboh (Ccrboh)
Name (synonym) CcolRboh (Ccrboh)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Citrullus
Organism Citrullus colocynthis    [TaxId: 252529 ]
Cellular localisation N/D
Tissue type Seeds
Inducer Germination
Repressor N/D
Best BLASTp hits
Perox score E-value CcolRboh
start..stop
S start..stop
PtRboh04 1473 0 7..926 11..926
CsRboh02 1468 0 7..926 10..912
CclRboh02 1468 0 7..926 10..912
EgrRboh05 1425 0 26..926 31..967
Literature and cross-references CcolRboh (Ccrboh)
Literature REFERENCE 1 Si,Y., Zhang,C., Meng,S. and Dane,F.Gene expression changes in response to drought stress in Citrullus colocynthis. Plant Cell Rep. 28 (6), 997-1009 (2009).
REFERENCE 2 Si, Y., Dane F., Rashotte R., Kang K. and Singh NK. Cloning and expression analysis of the Ccrboh gene encoding respiratory burst oxidase in Citrullus colocynthis and grafting onto Citrullus lanatus (watermelon). J Ex Bot. 61 (6), 1635-1642 (2010).
mRNA ref. GenBank:   EU580727.2
Protein sequence: CcolRboh (Ccrboh)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   926
PWM (Da):   %s   103897.39 Transmb domain:   %s   o368-390i511-533o553-575i736-753o
PI (pH):   %s   9.53
Sequence
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Send to Peroxiscan
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MRPHEPYSEN NSDAESVASV RRGGDRRAFS GPISSTTKPR KNAKFDLSSS SSSPKAADDD DTYVEITLDI RDDSVAVHSV HTAGAAQDPN SLEDPELSLL AKRTLEKKSS SFRASVLRST  SSRFKQVSQE LKRFTSLNRR ASTRRFDRTK SAATHALKGL KFIAAKTGGG GSSPGWAPVE KRFDELTAST NGLLPSSLFG ECIGMNKDSK EFAGELFRAL ARRRNITGDS INKAQLKEFW  DQISDDSFDS RLQTFFDMVD TDADGRITEE EVEEIISMSA SANKLSTIQK QAKEYAALIM EELDPGNAGY IMIHNLETLL LQAPNQSVRV SDSRVLSQLL SQKLKPTNET NPIIRTYDKF  QYFVEDNWQR IWVILLWLGI CGGLFAYKFI QYRHRAVFNV MGYCVSIAKG GAETLKFNMA LIILPVCRNT ITWLRNKTRL GVIVPFDDNL NFHKVIAVGI SVGVGLHAIA HLTCDFPRLL  HATEEQYEPM KPSFGEEQPD NYWWFVKGVE GVTGIIMVVL MAIAFTLATP WFRRNKLNVP KPFKKLTGFN AFWYSHHLFV IVYVLLVVHG IYLYLTKEWY KKTTWMYLAV PVVLYACERL  IRAFRSGIKP VKILKVAVYP GNVLALHMSK PHGFKYKSGQ YMFVNCRDVS PFEWHPFSIT SAPEDNYLSV HIRTLGDWTR QLKTVFSEVC QPPQAGKSGL LRAEFVQGGA PNPKFPKILI  DGPYGAPAQD YKKYDVVLLV GLGIGATPMV SIVKDIIDNI EGKEAEANAV ENGQGHSSRG GSKHGKGFRT RKAYFYWVTR EQGSFEWFKG IMNEVAEMDE RGVIELHNYC TSVYEEGDAR 
SALIAMLQSL QHAKSGVDVV SGTRVKSHFA KPNWRQVYKK ITIHHPDTRV GVSYCGAPAL TRELSQLASD FSRKTSTKFE FHKENF 

Retrieve as FASTA  
Remarks Complete sequence from mRNA.
CDS
Send to BLAST
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ATGAGACCTC ACGAACCTTA TTCTGAGAAC AATTCCGACG CCGAGAGCGT CGCCAGCGTC AGAAGGGGAG GTGATCGGAG AGCCTTCAGC GGCCCAATTT CATCCACTAC TAAGCCAAGG  AAGAATGCTA AATTCGACCT CTCTTCTTCT TCTTCCTCAC CCAAGGCCGC CGATGACGAC GATACATATG TTGAAATCAC CCTCGATATT CGCGATGACT CTGTCGCCGT CCACAGCGTT  CACACCGCCG GCGCCGCCCA AGATCCCAAC TCTCTTGAAG ACCCTGAACT TTCCCTACTC GCCAAGAGAA CTCTCGAGAA GAAATCTTCC TCTTTCCGAG CATCTGTTCT TCGTTCCACT  TCTTCCCGTT TCAAACAGGT CTCTCAGGAA CTCAAACGCT TCACCTCGCT CAACCGCCGC GCCTCCACTC GCCGCTTCGA CCGGACCAAA TCTGCAGCCA CCCACGCTCT TAAGGGGCTC  AAGTTCATCG CCGCCAAAAC CGGCGGTGGG GGATCCTCCC CCGGTTGGGC TCCGGTTGAG AAGCGGTTCG ATGAACTCAC CGCCTCCACC AACGGCCTCC TTCCGTCGTC CTTGTTCGGA  GAATGCATTG GAATGAACAA AGATTCGAAA GAGTTCGCCG GTGAGCTTTT TCGTGCACTT GCTCGTAGGC GCAACATTAC CGGTGATTCC ATCAACAAAG CTCAACTCAA AGAGTTTTGG  GATCAGATCT CCGATGACAG CTTCGATTCC AGGCTACAAA CTTTCTTTGA CATGGTGGAT ACGGACGCAG ATGGAAGAAT CACAGAAGAA GAAGTCGAAG AGATTATTAG CATGAGTGCT  TCTGCTAACA AGCTATCCAC GATTCAAAAA CAAGCAAAAG AATACGCCGC CTTGATCATG GAAGAACTCG ACCCAGGAAA TGCAGGATAC ATCATGATAC ACAATCTGGA AACTCTGTTA  TTACAAGCTC CGAATCAATC AGTGAGGGTA AGCGACAGCC GAGTTCTGAG TCAATTACTG AGCCAAAAAC TGAAGCCAAC AAACGAAACC AACCCCATCA TAAGAACATA CGACAAATTC  CAGTACTTTG TAGAAGACAA TTGGCAGAGG ATTTGGGTGA TATTGCTCTG GCTTGGCATC TGCGGCGGGC TCTTCGCCTA CAAATTCATC CAATATCGCC ACAGAGCAGT GTTCAACGTA  ATGGGTTACT GCGTTTCAAT CGCTAAAGGA GGAGCCGAAA CTCTAAAATT CAACATGGCT CTAATTATAC TCCCTGTTTG TCGTAACACA ATCACTTGGC TTCGTAACAA AACCAGATTA  GGCGTCATCG TTCCTTTCGA TGACAATCTT AATTTCCACA AGGTTATAGC AGTGGGGATT TCCGTAGGAG TGGGATTACA CGCAATCGCC CATTTGACTT GCGATTTTCC CCGGCTTCTC  CACGCAACAG AGGAACAATA CGAGCCAATG AAGCCCTCCT TTGGAGAAGA GCAGCCTGAT AATTATTGGT GGTTTGTAAA AGGAGTGGAA GGAGTTACAG GGATTATAAT GGTTGTGTTA  ATGGCCATTG CTTTCACATT AGCCACTCCA TGGTTTAGAA GAAACAAGCT CAATGTACCT AAACCCTTCA AGAAACTCAC TGGCTTCAAT GCCTTTTGGT ACTCCCACCA TCTCTTCGTC  ATCGTTTACG TCCTCCTTGT CGTCCACGGT ATCTACCTCT ACTTAACCAA AGAATGGTAT AAGAAAACGA CATGGATGTA TTTGGCTGTA CCAGTTGTTC TTTACGCGTG CGAAAGGTTA  ATAAGAGCAT TTAGATCGGG TATCAAGCCA GTGAAGATCC TTAAGGTGGC TGTTTATCCC GGAAACGTTC TGGCACTGCA CATGTCTAAG CCACATGGTT TCAAATACAA GAGTGGGCAA  TATATGTTTG TTAACTGCCG AGACGTATCC CCTTTTGAGT GGCATCCATT TTCAATTACT TCAGCCCCAG AAGATAATTA TTTGAGTGTT CATATTCGGA CACTTGGTGA CTGGACAAGG  CAACTCAAGA CTGTTTTCTC AGAGGTTTGT CAGCCTCCTC AAGCTGGAAA AAGTGGACTT CTCAGAGCTG AATTCGTGCA AGGAGGAGCT CCTAATCCTA AGTTCCCTAA AATATTGATC  GACGGTCCAT ACGGGGCACC AGCACAAGAT TATAAGAAAT ACGACGTGGT ATTACTAGTA GGGTTAGGAA TTGGGGCAAC ACCTATGGTG AGTATAGTGA AAGACATAAT CGACAACATA  GAGGGGAAAG AAGCAGAAGC AAATGCAGTA GAGAATGGGC AAGGGCATAG TAGCCGAGGT GGGAGCAAGC ACGGGAAAGG GTTTAGAACT CGAAAGGCGT ACTTTTATTG GGTGACGAGA  GAGCAAGGAT CATTTGAATG GTTTAAAGGG ATAATGAACG AGGTAGCGGA AATGGACGAG AGAGGGGTGA TCGAGCTACA CAACTATTGC ACGAGCGTGT ACGAGGAAGG GGATGCTAGG  TCCGCGTTGA TAGCAATGCT TCAGTCATTG CAACATGCGA AGAGTGGGGT GGATGTGGTA TCAGGGACTC GAGTAAAGTC TCATTTTGCT AAGCCAAATT GGAGGCAAGT TTACAAAAAG  ATAACTATTC ATCATCCAGA TACAAGGGTT GGAGTGTCTT ATTGTGGGGC ACCCGCACTT ACTAGGGAGC TTAGTCAATT GGCTTCGGAT TTCTCTCGTA AAACATCCAC TAAATTTGAG 
TTTCATAAAG AGAACTTCTA A 

Retrieve as FASTA