Entry information : Cja2CysPrx[P]02
Entry ID 7633
Creation 2010-10-19 (Myriam Duval)
Last sequence changes 2010-10-27 (Myriam Duval)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2011-08-16 (Christophe Dunand)
Peroxidase information: Cja2CysPrx[P]02
Name Cja2CysPrx[P]02
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Metazoa Chordata Mammalia Cebidae Callithrix
Organism Callithrix jacchus (Common marmoset)    [TaxId: 9483 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Cja2CysPrx[P]02
start..stop
S start..stop
Cja2CysPrx02 211 4e-72 1..108 91..198
Ptro2CysPrx02-1 211 5e-72 1..108 91..198
Mmul2CysPrx02 211 5e-72 1..108 91..198
Mfa2CysPrx02 211 5e-72 1..108 91..198
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..324 324  
complement(join(1..324))


exon

Literature and cross-references Cja2CysPrx[P]02
Protein ref. GenBank:   XP_002757684.1
DNA ref. GenBank:   NC_013909.1 (41744156..41744774)
Protein sequence: Cja2CysPrx[P]02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   108
PWM (Da):   %s   11888.04  
PI (pH):   %s   4.86
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

RKEGGLGPLN IPLLADVTRC LSEDYGVLKT DEDIAYRGLF VIDCKGVLRQ ITVNDLPVGR SVDEALRLVQ AFQYTDKHGE VCPAGWKPGS DTIKPNMDDS KEYFSKHN 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (chromo 14, no intron). First half (5') of the protein missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CGGAAGGAGG GAGGCTTGGG CCCCCTAAAC ATCCCCCTGC TTGCTGATGT GACCAGATGC TTGTCTGAGG ATTATGGCGT GCTGAAAACA GATGAGGACA TTGCCTACAG GGGTCTCTTT  GTCATCGATT GCAAGGGTGT CCTTCGCCAG ATCACTGTTA ATGATTTGCC TGTGGGACGC TCCGTGGATG AGGCTCTTCG ATTGGTTCAG GCCTTCCAGT ACACGGACAA GCATGGGGAA 
GTTTGTCCTG CTGGCTGGAA GCCTGGCAGT GACACGATTA AGCCCAACAT GGATGACAGC AAGGAATATT TCTCCAAACA CAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CGGAAGGAGG GAGGCTTGGG CCCCCTAAAC ATCCCCCTGC TTGCTGATGT GACCAGATGC TTGTCTGAGG ATTATGGCGT GCTGAAAACA GATGAGGACA TTGCCTACAG GGGTCTCTTT  GTCATCGATT GCAAGGGTGT CCTTCGCCAG ATCACTGTTA ATGATTTGCC TGTGGGACGC TCCGTGGATG AGGCTCTTCG ATTGGTTCAG GCCTTCCAGT ACACGGACAA GCATGGGGAA 
GTTTGTCCTG CTGGCTGGAA GCCTGGCAGT GACACGATTA AGCCCAACAT GGATGACAGC AAGGAATATT TCTCCAAACA CAAT 

Retrieve as FASTA