Entry information : Cja2CysPrx[P]01
Entry ID 7635
Creation 2010-10-19 (Myriam Duval)
Last sequence changes 2010-10-27 (Myriam Duval)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2011-08-16 (Christophe Dunand)
Peroxidase information: Cja2CysPrx[P]01
Name Cja2CysPrx[P]01
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Metazoa Chordata Mammalia Cebidae Callithrix
Organism Callithrix jacchus (Common marmoset)    [TaxId: 9483 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Cja2CysPrx[P]01
start..stop
S start..stop
Cja2CysPrx01 184 4e-61 13..105 107..199
Cfa2CysPrx01 179 2e-59 13..105 107..199
Ptro2CysPrx01-1 179 2e-59 13..105 107..199
Hs2CysPrx01 179 2e-59 13..105 107..199
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..270 270  
complement(join(1..270))


exon

Literature and cross-references Cja2CysPrx[P]01
Protein ref. GenBank:   XP_002751455
DNA ref. GenBank:   NC_013903 (14231331..14237591)
Protein sequence: Cja2CysPrx[P]01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   105
PWM (Da):   %s   11677.03  
PI (pH):   %s   8.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MYLTGSPQKG AREKNRTIAQ DYGVLKADEG ISFRGLFIID EKGVLRQITV HDLPVGRSVD ETLRLVQAFQ FTDKHGEVCP AGWKPGSDTI KPDVQKSKEY FCKQK 

Retrieve as FASTA  
Remarks Pseudogene from genomic (chromo 8, no intron). 5'end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CGCACTATTG CTCAGGATTA TGGGGTCTTA AAGGCAGATG AAGGCATCTC ATTCAGGGGC CTCTTTATCA TTGATGAAAA GGGTGTTCTT CGGCAGATCA CTGTACATGA CCTCCCTGTT  GGCCGCTCTG TGGATGAGAC TTTGAGACTA GTTCAGGCCT TCCAGTTCAC TGACAAACAT GGGGAAGTGT GCCCAGCTGG CTGGAAACCT GGCAGTGATA CCATCAAGCC TGATGTCCAA 
AAGAGCAAAG AATATTTCTG CAAACAGAAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CGCACTATTG CTCAGGATTA TGGGGTCTTA AAGGCAGATG AAGGCATCTC ATTCAGGGGC CTCTTTATCA TTGATGAAAA GGGTGTTCTT CGGCAGATCA CTGTACATGA CCTCCCTGTT  GGCCGCTCTG TGGATGAGAC TTTGAGACTA GTTCAGGCCT TCCAGTTCAC TGACAAACAT GGGGAAGTGT GCCCAGCTGG CTGGAAACCT GGCAGTGATA CCATCAAGCC TGATGTCCAA 
AAGAGCAAAG AATATTTCTG CAAACAGAAG 

Retrieve as FASTA