Entry information : CjaGPx04-B
Entry ID 7636
Creation 2010-10-20 (Myriam Duval)
Last sequence changes 2012-05-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-11 (Christophe Dunand)
Peroxidase information: CjaGPx04-B
Name CjaGPx04-B
Class Animal glutathione peroxidase    [Orthogroup: Gpx1002]
Taxonomy Eukaryota Metazoa Chordata Mammalia Cebidae Callithrix
Organism Callithrix jacchus (Common marmoset)    [TaxId: 9483 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CjaGPx04-B
start..stop
S start..stop
PtroGPx04 339 1e-121 1..167 1..167
HsGPx04-A 339 1e-121 1..167 1..167
HsGPx04-B 340 1e-121 1..167 1..167
PpyGPx04-A 339 2e-121 1..167 1..167
Literature and cross-references CjaGPx04-B
Protein sequence: CjaGPx04-B
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   167 (142)
PWM (Da):   %s   18264.09 (15774.7)  
PI (pH):   %s   8.68 (8.21) Peptide Signal:   %s   cut: 26 range:26-167
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSLGRLCRLL KPALLCGALA APGLAGTMCA SQDDWRSARS MHEFSAKDID GHTVNLDKYR GFVCIVTNVA SQUGKTQVNY TQLVDLHARY AECGLRILAF PCNQFGKQEP GSNEEIKEFA 
AGYNVKFDMF SKICVNGDDA HPLWKWMKIQ PKGKGTLGNA IKWNFTK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 22, 4 introns). Undetermined sequence in the intron 1 (n => uncorrecte prediction from NCBI. Seleno cysteine posn 72. Position 168 (F) à vérifier. join(1..84,1355..1449,1535..1679,1798..1949,2120..2144,2267..2326,2403..2432)
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCCTCG GTCGCCTGTG CCGCTTGCTG AAGCCGGCGC TGCTGTGTGG GGCTCTGGCC GCGCCAGGCC TGGCCGGCAC CATGGTAAGC GGTGGCCGCG GTTGTCGCCG GCCCGGGGAG  TGTTCGGCCG GGAGCACGAC CCCCGCCTCC GGTCGCCGGC GCGGGGAACC CTCGGGCCCC CGTGACCTTC GTCCTGGTAG TTCCCTCTCC CCATCCCCGG CCGGGCGCCG ACGCGGGTGA  CCGCACTGCG ACGCTCTCCA AGGCCGTCCA GGCCGTTACT TGCGCGCGGG CCCGAGGTCG GGGAAGGGGA AGGGGCGGTC CCGAGCGCGC GGGCGGAGGT CCGGAAAGGG GAGGGGGAAG  GGCCTGTTCC TAGCGCGAGG GACCGTGGCC GGGGTCGGGG GTTCCAGCCT GGCCGGGGnn nnnnnnnnCC GGGTCAGGTC CAGCTGCGGG CGGGGCGGGG GCGGGGGCGA GTCCGGGTCG  CAAGGGGGTG GGGCGGTCCA GGCTGAGGGC GAAGCGGGTC CGGGTTCGGG GTCCGGGATC GCTGGGGGGT GGGGATGGGA TTCAGGCTGG AGGGGCGGGG GCGGGGTCCG GGGTCCGGGA  CGGCTGGGGG GTGGCGGGCG GGGTCCGGGG TTCGGGACCG CTGAGCGGAG CTGGGCCGTT GGGGACCCTT GGCGGGCGTC TCCGGTCGGA GGGAGGCTGC TGCGCCGTGG CGGCTGCGGG  CGCGGAGGGC TGGAAACCTG GGATCACGCG CCCCTGGGCG CCGCCCCGCC CCCGCGCCCT GACCCAGCGC GGTGGCGTCA CAGTCGCGCG GTCCAGACTA CGGCCTCCGG GCCTCTGTTC  CCGGGCTCGG CGCTCGGGGG CCAGGCGGGG CCGCAGACGG GCAGGGATGG GCTGCGCGGG CGCAGGCTCC CCAGAGCGCA GCCGGAAGCG GTACCGGAGC CGGGGTAGGC GGCGGCCGCG  GGCCCCCCGG CGGCGGAAGG CCCCAGCGTG CAGGCGCAGG AAGGTGCGCC GCCGGCGGAA GGAGCCCTGT CCCCACCGCT TGGGGCCGGA CATGAGCAAG AGTCTCGAGT CCCAGGACCC  GGTGCGCGCG GGGCCCCCAC ACCTGCTGCT GTGGCACTTT CTGGGGTTGG AACCCTCTCC CGGCCTCGGG TTCTCCGGTA AAACGGGATC GTAGGCACTA GGGGGCGTGT CCACTTAGGG  AGGAGGAGCT TTGAGGTGTT GAGTGCCCCC GGGCCCGGGT TTCCCGCCAT AGACCCGCTC CGGATCTGTT CCTGCCCCGG GACCCTGGGC TGGTGCGCGG GCCGTGGCCT CGGTTTCCCG  TCCGCGCTCC TGGTTAAGCC CCCTTGTTTT GCAGTGCGCG TCCCAGGACG ACTGGCGCTC AGCGCGCTCC ATGCACGAGT TTTCCGCCAA GGACATCGAC GGGCACACGG TTAACCTGGA  CAAGTACCGG TGGGCGCTCG CCTGGGGCGG GGCGCAGGGC GGGGGCCTGG GAGGGGGCCG TGCTCTCGGT ACTGAGCCCC GCCGACTCTC GCAGGGGCTT CGTGTGCATC GTCACCAACG  TGGCCTCCCA GTGAGGCAAA ACCCAGGTGA ACTACACTCA GCTTGTCGAC CTGCACGCCC GATACGCCGA GTGCGGTTTG CGGATCCTGG CCTTCCCCTG CAACCAGTTC GGGAAGCAGG  TGGGCGGCTG CCCGCGTCCC CAGGACCCTG GCTCCGCAGA GCCCGGTGGG TGGGAGCGGG AGCCTGGGCT GAGGGGTACC GGGCCCCCGA CCCACTCGCG CTCCTCCCCT GCCACAGGAG  CCAGGGAGTA ACGAAGAGAT CAAAGAGTTC GCCGCTGGCT ATAACGTCAA ATTCGACATG TTCAGCAAGA TCTGCGTGAA CGGGGATGAC GCCCACCCGC TGTGGAAGTG GATGAAGATC  CAGCCCAAGG GAAAGGGCAC CCTGGGGAAG TGCGTGATCT CTGGGGACGG CGTGGCTGCT GGGACGCTCA CACCTCCCGG GGGCAGAATG GCTTAGGGGC TGCTGGGACG TTCACACTGT 
GTGGCCCCTG GGGACAGGTT GGCTGGGGGC GTCCGTGGGG GCTGCTGGGG ACGCTTATGC CCATGTGCTT CCTTTCCAGT GCCATCAAGT GGAACTTCAC CAAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCCTCG GTCGCCTGTG CCGCTTGCTG AAGCCGGCGC TGCTGTGTGG GGCTCTGGCC GCGCCAGGCC TGGCCGGCAC CATGTGCGCG TCCCAGGACG ACTGGCGCTC AGCGCGCTCC  ATGCACGAGT TTTCCGCCAA GGACATCGAC GGGCACACGG TTAACCTGGA CAAGTACCGG GGCTTCGTGT GCATCGTCAC CAACGTGGCC TCCCAGTGAG GCAAAACCCA GGTGAACTAC  ACTCAGCTTG TCGACCTGCA CGCCCGATAC GCCGAGTGCG GTTTGCGGAT CCTGGCCTTC CCCTGCAACC AGTTCGGGAA GCAGGAGCCA GGGAGTAACG AAGAGATCAA AGAGTTCGCC  GCTGGCTATA ACGTCAAATT CGACATGTTC AGCAAGATCT GCGTGAACGG GGATGACGCC CACCCGCTGT GGAAGTGGAT GAAGATCCAG CCCAAGGGAA AGGGCACCCT GGGGAATGCC 
ATCAAGTGGA ACTTCACCAA G 

Retrieve as FASTA