Entry information : SpraAPx01
Entry ID 7703
Creation 2010-10-29 (Qiang Li)
Last sequence changes 2010-11-24 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-04-14 (Christophe Dunand)
Peroxidase information: SpraAPx01
Name SpraAPx01
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Zygnemataceae Spirogyra
Organism Spirogyra pratensis    [TaxId: 332123 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpraAPx01
start..stop
S start..stop
SsAPx01_AU1 420 1e-151 1..243 1..243
RobtAPx01 412 2e-148 2..245 3..246
PmargAPx05 394 7e-141 2..245 4..247
AcvAPx01 389 3e-139 3..246 5..248
Literature and cross-references SpraAPx01
Literature Timme,R.E. and Delwiche,C.F. Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra(Zygnematales) transcriptomes. BMC Plant Biol. 10 (1), 96 (2010).
EST ref. GenBank:   GW598207.1   GW599902.1   GW601717.1
Protein sequence: SpraAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   246
PWM (Da):   %s   27139.93  
PI (pH):   %s   6.05
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGYPVVSDEY KKAIEKLRRE LRALIAEKNC APIMVRLAWH SCGTYDVKTK TGGPNGSIRN KEELAHGANA GLGWAVEALE HLKEKFPIVS FADLYQLAGV VAVEVTGGPD IEFIPGRKDT  LKTPEEGRLP DATKGSDHLR AVFGTMGLSD KEIVVLSGAH TLGRCHKERS GFEGAWTHSP LHFDNSYFTE LLKGESEGLL QLPTDKVLVE DPIFRPFVEL YAKDEEVFFK DYAEAHKRLS 
ELGFAQ 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs. Strain="UTEX 921".
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTACC CAGTTGTAAG CGATGAATAC AAGAAGGCCA TTGAAAAATT AAGAAGAGAA CTTCGCGCTC TCATTGCTGA AAAGAACTGT GCTCCCATCA TGGTGCGTCT AGCTTGGCAT  AGCTGCGGAA CATACGACGT TAAAACCAAA ACCGGTGGTC CCAATGGAAG TATCAGAAAT AAGGAAGAGC TCGCACACGG TGCTAATGCT GGACTTGGAT GGGCCGTAGA AGCCCTTGAA  CACCTTAAAG AAAAATTTCC CATTGTCAGC TTCGCAGATT TATATCAGTT AGCCGGTGTA GTTGCAGTTG AGGTCACCGG AGGGCCTGAT ATTGAATTTA TTCCTGGCCG CAAGGATACT  CTTAAAACTC CCGAAGAAGG TCGCCTCCCT GATGCCACCA AGGGTTCTGA TCACTTACGT GCTGTATTCG GAACCATGGG CCTCTCTGAT AAGGAGATTG TTGTTCTTTC TGGAGCTCAC  ACTTTGGGAA GGTGCCATAA AGAGCGTTCA GGATTTGAAG GCGCATGGAC TCACTCCCCT CTCCATTTTG ACAACTCTTA CTTTACTGAG CTTTTGAAAG GAGAATCTGA AGGCCTTCTT  CAGTTGCCTA CTGACAAAGT CTTGGTTGAA GACCCTATCT TCCGTCCATT TGTTGAGCTT TATGCCAAAG ACGAGGAAGT ATTTTTCAAA GATTATGCTG AAGCTCACAA AAGACTCTCT 
GAACTTGGGT TTGCTCAATA A 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTTTAAGCT TATTATCTTT CGGCTTTTTA TCATCAACTT CAGTTTTTCA TCTTAATCTT TTTATCAATT GCCATGGGTT ACCCAGTTGT AAGCGATGAA TACAAGAAGG CCATTGAAAA  ATTAAGAAGA GAACTTCGCG CTCTCATTGC TGAAAAGAAC TGTGCTCCCA TCATGGTGCG TCTAGCTTGG CATAGCTGCG GAACATACGA CGTTAAAACC AAAACCGGTG GTCCCAATGG  AAGTATCAGA AATAAGGAAG AGCTCGCACA CGGTGCTAAT GCTGGACTTG GATGGGCCGT AGAAGCCCTT GAACACCTTA AAGAAAAATT TCCCATTGTC AGCTTCGCAG ATTTATATCA  GTTAGCCGGT GTAGTTGCAG TTGAGGTCAC CGGAGGGCCT GATATTGAAT TTATTCCTGG CCGCAAGGAT ACTCTTAAAA CTCCCGAAGA AGGTCGCCTC CCTGATGCCA CCAAGGGTTC  TGATCACTTA CGTGCTGTAT TCGGAACCAT GGGCCTCTCT GATAAGGAGA TTGTTGTTCT TTCTGGAGCT CACACTTTGG GAAGGTGCCA TAAAGAGCGT TCAGGATTTG AAGGCGCATG  GACTCACTCC CCTCTCCATT TTGACAACTC TTACTTTACT GAGCTTTTGA AAGGAGAATC TGAAGGCCTT CTTCAGTTGC CTACTGACAA AGTCTTGGTT GAAGACCCTA TCTTCCGTCC  ATTTGTTGAG CTTTATGCCA AAGACGAGGA AGTATTTTTC AAAGATTATG CTGAAGCTCA CAAAAGACTC TCTGAACTTG GGTTTGCTCA ATAAACATGG CCGCGTTCAT TCTGTTTTAG  GAAATTCTAA TTTATTTTAA AATTTCTAAT GATTTGGTTT CAAAATGTTT TCTGTAGCCT GTGTCTTTGC GGTGATGTTT TCATATGAAT TATTATTTAA TTTACAAATT TATTTGAGAA 
AAAAAAAAAA AAAAAAAAAA AA 

Retrieve as FASTA