Entry information : CglobPrx01
Entry ID 7708
Creation 2010-11-02 (Qiang Li)
Last sequence changes 2010-12-23 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-16 (Qiang Li)
Peroxidase information: CglobPrx01
Name CglobPrx01
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Chaetosphaeridiaceae Chaetosphaeridium
Organism Chaetosphaeridium globosum    [TaxId: 96477 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CglobPrx01
start..stop
S start..stop
SmPrx52-2_1 212 3e-66 50..356 46..346
SmPrx52-1_16 211 4e-66 50..356 46..346
SoPrx01 203 5e-63 54..356 35..330
MguPrx11 203 6e-63 41..356 22..328
Literature and cross-references CglobPrx01
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO389097.1   HO393189.1
Protein sequence: CglobPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   356 (329)
PWM (Da):   %s   38344.11 (35410.7)  
PI (pH):   %s   9.47 (9.71) Peptide Signal:   %s   cut: 28 range:28-356
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPSKGGPFLL TWAYILASGY LFVCCQSACT LPVFPPGYEA QYVPAQAFNG AMNLRLGFYN RSCPQLLSAV SRVIKGAVAE DITIIPALLR LANHEAVVTG FDASLLLAPG AGSPVPERSS  SKNLPIRGFK VIDQVKAAVE KTCRGIVSCA DIEALSAREA LFQGGGPWVP VRLGRRDGRL SRKNWADLLL PLPCLNATGV RTSFAMAGLN KSTDMLLLGA HTVGKAHCTN VVGELYPVAS 
PDMAPTLRSF LKIPGPNTAL NRDVTKILST STLFMEVLSP LLFDEGYFST LLEGQGLFKV DRQLLHDPVT RPLVTKFSRE PGAFNRFFVG AFGRMLELHV LTGRSGEIRK NCSLMN 

Retrieve as FASTA  
Remarks Complete sequence from ESTs (HO393189.1, HO389097.1, HO379543.1...). Containing motif nhea. Missing 'c'.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCATCCA AAGGAGGGCC ATTTCTGCTG ACGTGGGCTT ACATACTTGC CTCAGGCTAC CTCTTCGTAT GTTGCCAGTC TGCTTGCACC TTGCCTGTCT TCCCGCCAGG TTATGAGGCT  CAGTATGTGC CCGCTCAGGC ATTTAATGGA GCAATGAATT TGAGACTGGG ATTCTACAAC CGCTCCTGTC CTCAGCTTCT GTCCGCTGTG TCCAGAGTGA TAAAAGGTGC CGTTGCTGAA  GACATTACCA TCATACCAGC GCTGCTGCGC TTGGCAAACC ATGAAGCCGT GGTTACTGGC TTTGATGCCT CTCTCCTTCT GGCTCCTGGG GCCGGGAGTC CTGTTCCTGA GAGGTCTTCC  AGTAAAAATC TTCCGATACG TGGCTTCAAG GTCATTGACC AGGTGAAGGC TGCTGTGGAA AAAACATGCA GGGGCATCGT CTCCTGTGCA GACATTGAAG CCCTTTCGGC GAGAGAGGCA  CTGTTTCAGG GTGGGGGCCC ATGGGTGCCT GTGCGGCTTG GTCGACGAGA CGGGCGATTG TCCAGGAAGA ATTGGGCAGA TTTGCTTCTG CCCCTTCCGT GCCTCAATGC TACGGGTGTC  CGGACTTCTT TTGCAATGGC GGGACTGAAC AAGTCAACTG ATATGTTGTT GCTGGGTGCT CACACTGTCG GAAAGGCTCA CTGCACTAAC GTCGTGGGAG AATTATATCC GGTAGCTTCA  CCAGATATGG CCCCAACTCT GCGATCTTTC TTGAAGATCC CGGGACCCAA TACAGCACTT AACAGGGATG TGACAAAGAT CTTATCGACC TCCACTCTTT TCATGGAGGT TCTGTCACCG  CTCCTCTTTG ACGAAGGGTA TTTCAGCACT CTCTTGGAGG GACAGGGACT ATTTAAGGTG GATCGACAAC TCCTTCACGA CCCTGTCACA AGACCCTTGG TGACAAAATT CTCCAGAGAA 
CCCGGAGCAT TCAATCGGTT CTTTGTCGGA GCCTTCGGAC GCATGTTGGA ATTACATGTG CTCACTGGAC GTAGCGGAGA AATCCGCAAG AATTGTTCTC TCATGAATTA G 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTGGCCACTA GCACTTTGCT GTGACCATGC CATCCAAAGG AGGGCCATTT CTGCTGACGT GGGCTTACAT ACTTGCCTCA GGCTACCTCT TCGTATGTTG CCAGTCTGCT TGCACCTTGC  CTGTCTTCCC GCCAGGTTAT GAGGCTCAGT ATGTGCCCGC TCAGGCATTT AATGGAGCAA TGAATTTGAG ACTGGGATTC TACAACCGCT CCTGTCCTCA GCTTCTGTCC GCTGTGTCCA  GAGTGATAAA AGGTGCCGTT GCTGAAGACA TTACCATCAT ACCAGCGCTG CTGCGCTTGG CAAACCATGA AGCCGTGGTT ACTGGCTTTG ATGCCTCTCT CCTTCTGGCT CCTGGGGCCG  GGAGTCCTGT TCCTGAGAGG TCTTCCAGTA AAAATCTTCC GATACGTGGC TTCAAGGTCA TTGACCAGGT GAAGGCTGCT GTGGAAAAAA CATGCAGGGG CATCGTCTCC TGTGCAGACA  TTGAAGCCCT TTCGGCGAGA GAGGCACTGT TTCAGGGTGG GGGCCCATGG GTGCCTGTGC GGCTTGGTCG ACGAGACGGG CGATTGTCCA GGAAGAATTG GGCAGATTTG CTTCTGCCCC  TTCCGTGCCT CAATGCTACG GGTGTCCGGA CTTCTTTTGC AATGGCGGGA CTGAACAAGT CAACTGATAT GTTGTTGCTG GGTGCTCACA CTGTCGGAAA GGCTCACTGC ACTAACGTCG  TGGGAGAATT ATATCCGGTA GCTTCACCAG ATATGGCCCC AACTCTGCGA TCTTTCTTGA AGATCCCGGG ACCCAATACA GCACTTAACA GGGATGTGAC AAAGATCTTA TCGACCTCCA  CTCTTTTCAT GGAGGTTCTG TCACCGCTCC TCTTTGACGA AGGGTATTTC AGCACTCTCT TGGAGGGACA GGGACTATTT AAGGTGGATC GACAACTCCT TCACGACCCT GTCACAAGAC  CCTTGGTGAC AAAATTCTCC AGAGAACCCG GAGCATTCAA TCGGTTCTTT GTCGGAGCCT TCGGACGCAT GTTGGAATTA CATGTGCTCA CTGGACGTAG CGGAGAAATC CGCAAGAATT  GTTCTCTCAT GAATTAGGTG TTTGAGATGG CTCATCGATT GCATGGCGGG GAGGACATGT GCTTTGGTCT TGTTTCGGCA TTCCTCTTTG TCTTTGGAAA CAAGGAGGAT TCCATACCAA  CTGCTCTCCT ATGATGTAGA TGATTAAGAT GTGCCATGGA TTGCAAGCCG TGAAGATGAT TTGTGTTTGT CGCATGTCAG ACATGAAGCT GGGCAGTAAA GAAAATCCAC AAGTGTTCTC  TTATGGCTGG CCTTGAGGTG TGCCCCTTCA AGTGATTACG GCAAGAATTC TCTCCTTCTC TAGGTGATTG ATGTGTCTGA TTACTAAGGA CATATTGGAA AATCAAGGAT GTAAAAACAT 
TTTGGAAAAC AGTTCCTCGA AGAGCTTTGT ACCAATGACA ACACCATTAC GTTCTACTAA GTTCTATTGT T 

Retrieve as FASTA