Entry information : CglobPrx02
Entry ID 7712
Creation 2010-11-02 (Qiang Li)
Last sequence changes 2010-12-22 (Qiang Li)
Sequence status partial
Reviewer Marie Brette
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: CglobPrx02
Name CglobPrx02
Class Class III peroxidase     [Orthogroup: Prx084]*
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Chaetosphaeridiaceae Chaetosphaeridium
Organism Chaetosphaeridium globosum    [TaxId: 96477 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CglobPrx02
start..stop
S start..stop
CscPrx07 352 1e-122 1..299 11..317
CirPrx10 339 2e-117 1..299 6..311
ScucPrx28 274 2e-91 1..300 41..333
ScucPrx31 274 3e-91 1..300 47..341
Literature and cross-references CglobPrx02
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO392186.1
Protein sequence: CglobPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   304
PWM (Da):   %s   32779.33  
PI (pH):   %s   6.5
Sequence
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Send to Peroxiscan
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FYAKSCPKVE TIVASHVNGA TADDDTHPGA LLRLFFHDCF VHGCDASLLL NHTGSEQDAS PNLTLDGFDI INDIKAELEA TxPGTVSCAD ILALTARFSV KAAGGPDIKL PLGRRDSNET  SYKASAEACL PDHNAKVNGL VDNFRGVGLN LFDVIALSGA HTIGQGHCNN IQDRLYKTDG TKKVDLSLNQ AYAKSDLYTT CPSYVAAPTT VADIELVNQT FQDPTTNTKF DNGYYKALLT 
RRGMFTSDQV LYDDFRSRGL VKLFALNQDA FFASFKYSMV RMGNINALTG NKGIIRKVCF SNSA 

Retrieve as FASTA  
Remarks Partial sequence form EST (HO392186.1). Short 5' end is missing.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTCTACGCAA AGTCGTGCCC CAAAGTCGAA ACGATTGTGG CGAGCCACGT GAACGGCGCG ACGGCGGACG ACGACACCCA CCCCGGGGCC CTCCTGCGCC TCTTCTTCCA CGACTGCTTC  GTGCACGGCT GCGACGCCTC TCTTCTCCTC AACCACACGG GGTCCGAGCA AGATGCCAGT CCTAACTTGA CCCTTGACGG CTTCGACATC ATCAATGACA TCAAGGCGGA GCTCGAGGCA  ACGTnCCCGG GGACAGTCTC TTGCGCCGAC ATCCTTGCCC TCACCGCCCG CTTCTCCGTC AAGGCGGCTG GCGGCCCTGA CATCAAGCTC CCCCTGGGCC GTCGGGACTC GAACGAGACC  TCGTACAAGG CGAGCGCGGA GGCATGCCTG CCCGACCACA ACGCGAAGGT GAACGGACTC GTGGACAATT TCCGCGGGGT GGGGCTGAAC CTGTTCGACG TGATCGCCCT CTCCGGCGCG  CACACGATCG GCCAGGGACA CTGCAACAAC ATCCAAGACC GGTTGTACAA GACTGACGGG ACCAAAAAGG TGGACCTTTC GCTCAACCAA GCATATGCCA AGAGCGACCT ATATACTACA  TGTCCCTCAT ATGTCGCCGC ACCGACCACA GTCGCCGACA TCGAGCTGGT GAACCAAACG TTTCAGGACC CCACCACGAA CACCAAGTTC GACAACGGTT ACTACAAGGC GCTCCTCACA  AGGAGGGGGA TGTTCACGAG CGACCAGGTG TTATATGACG ACTTCCGCTC AAGGGGGCTC GTGAAACTGT TTGCTCTGAA CCAGGATGCC TTTTTTGCCT CCTTCAAATA TTCAATGGTG 
CGCATGGGCA ACATCAACGC ACTCACGGGA AATAAGGGGA TTATCCGCAA GGTCTGCTTC AGCAATTCAG CATAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTCTACGCAA AGTCGTGCCC CAAAGTCGAA ACGATTGTGG CGAGCCACGT GAACGGCGCG ACGGCGGACG ACGACACCCA CCCCGGGGCC CTCCTGCGCC TCTTCTTCCA CGACTGCTTC  GTGCACGGCT GCGACGCCTC TCTTCTCCTC AACCACACGG GGTCCGAGCA AGATGCCAGT CCTAACTTGA CCCTTGACGG CTTCGACATC ATCAATGACA TCAAGGCGGA GCTCGAGGCA  ACGTnCCCGG GGACAGTCTC TTGCGCCGAC ATCCTTGCCC TCACCGCCCG CTTCTCCGTC AAGGCGGCTG GCGGCCCTGA CATCAAGCTC CCCCTGGGCC GTCGGGACTC GAACGAGACC  TCGTACAAGG CGAGCGCGGA GGCATGCCTG CCCGACCACA ACGCGAAGGT GAACGGACTC GTGGACAATT TCCGCGGGGT GGGGCTGAAC CTGTTCGACG TGATCGCCCT CTCCGGCGCG  CACACGATCG GCCAGGGACA CTGCAACAAC ATCCAAGACC GGTTGTACAA GACTGACGGG ACCAAAAAGG TGGACCTTTC GCTCAACCAA GCATATGCCA AGAGCGACCT ATATACTACA  TGTCCCTCAT ATGTCGCCGC ACCGACCACA GTCGCCGACA TCGAGCTGGT GAACCAAACG TTTCAGGACC CCACCACGAA CACCAAGTTC GACAACGGTT ACTACAAGGC GCTCCTCACA  AGGAGGGGGA TGTTCACGAG CGACCAGGTG TTATATGACG ACTTCCGCTC AAGGGGGCTC GTGAAACTGT TTGCTCTGAA CCAGGATGCC TTTTTTGCCT CCTTCAAATA TTCAATGGTG  CGCATGGGCA ACATCAACGC ACTCACGGGA AATAAGGGGA TTATCCGCAA GGTCTGCTTC AGCAATTCAG CATAGTAACA ACGGGTTCTA GGGGTTAGGA CGCATCTACA AAAATAGGGG  TTCGTTAATT TAGTATTCGG AGACATCAAC AATGAGGGCA TTATCCTCAA GGTCTGCTTT AGCAAGTTTC TAACAACCCC GGCTTAGGAA TGCAAGTGGG ACAAAGTGGC GGGATTAAAA  GTATTTGCAC AATGTGTCTC TCCCTTGTTT CTAGCTACCA CAACTTGCAA ATAAAAGGTG CCTGAGGTAA AAGCTCATGC GCCTCGGTTT GCTTCATCAA TCCTCCAACG ACCTGACAAT  AGGGTCAGTT TTGGGCATAA CATAAGATTT GGGGTTACCA TGAGGCTTAG ACTCGCAAGG TACGTATGGG CTAGGGCTTG GGGTTTTGTA GACAATCAAG ATTTTCTTAA AATGGAAAAA  ATGTGCACGT CGTGCTTCGA TAATCCTCGG CCAACCTCGG CTTATAAACA ACAAAGGCTA CACACCAACT CTATATTATT TCCAAACACG TGAACTTCCT TGTTCCTTTT TCTGAGAATA  ATATATATTC CTTTGGTAGC TTGAAAAAAT AAAATAAAGG AAAGAAGACC CTAAGCCCTA AACCCTGAGC TCCCTAGACT CGCTGAACTC TTTTTCTGAG AATAATATAT ATTCCTTTGG 
TAGCTT 

Retrieve as FASTA