Entry information : CglobPrx03
Entry ID 7714
Creation 2010-11-02 (Qiang Li)
Last sequence changes 2010-12-02 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: CglobPrx03
Name CglobPrx03
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Chaetosphaeridiaceae Chaetosphaeridium
Organism Chaetosphaeridium globosum    [TaxId: 96477 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CglobPrx03
start..stop
S start..stop
CglobPrx02 172 7e-54 1..182 122..302
CscPrx07 165 4e-51 4..179 142..317
CirPrx10 143 2e-42 5..179 138..311
GmPrx71 138 2e-40 5..181 160..327
Literature and cross-references CglobPrx03
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO366674.1
Protein sequence: CglobPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   182
PWM (Da):   %s   20271.5  
PI (pH):   %s   11.06
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
FLQNAGRCLP SEFSPALGLS VNFRKVGLNR TDLISLSGAH TIGRGHCHFF QDRLFDATTG RRRLDPTLNR TYARTSLYRT CRTYKPPPIN RAQALKGKAR NMDPFTGVKF DNKYFQGLLL 
RQGMFVSDQT LFDTEATKSM VVGFANNQAA FFKAFSESFI RMGGINVLTA PAGVIRKVCF KN 

Retrieve as FASTA  
Remarks Partial sequence from EST (HO366674.1). 5' end is missing.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTCCTCCAAA ACGCGGGTCG CTGCCTCCCA TCAGAGTTCT CCCCAGCTCT CGGCCTCTCT GTCAACTTCA GGAAAGTCGG CTTGAACCGC ACCGACTTGA TCTCCCTCTC CGGTGCGCAC  ACCATCGGCC GCGGCCATTG CCACTTCTTC CAGGACCGCC TATTCGATGC AACCACTGGG AGGCGGAGGC TTGACCCCAC CTTGAACCGG ACATACGCCA GAACTTCTCT GTACCGAACT  TGCCGGACCT ACAAACCCCC CCCGATCAAC CGGGCGCAGG CACTGAAGGG GAAGGCCCGC AATATGGACC CGTTCACGGG GGTGAAGTTT GACAACAAGT ACTTCCAGGG GCTTCTGCTG  CGTCAAGGCA TGTTTGTCTC GGACCAAACG TTGTTTGACA CGGAGGCCAC CAAAAGCATG GTGGTGGGGT TTGCAAATAA CCAGGCTGCG TTCTTCAAGG CATTCTCAGA GTCTTTCATC 
CGCATGGGGG GAATCAATGT GCTCACAGCC CCAGCGGGGG TCATCAGGAA AGTGTGTTTC AAGAACTAG 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTTCCTCCA AAACGCGGGT CGCTGCCTCC CATCAGAGTT CTCCCCAGCT CTCGGCCTCT CTGTCAACTT CAGGAAAGTC GGCTTGAACC GCACCGACTT GATCTCCCTC TCCGGTGCGC  ACACCATCGG CCGCGGCCAT TGCCACTTCT TCCAGGACCG CCTATTCGAT GCAACCACTG GGAGGCGGAG GCTTGACCCC ACCTTGAACC GGACATACGC CAGAACTTCT CTGTACCGAA  CTTGCCGGAC CTACAAACCC CCCCCGATCA ACCGGGCGCA GGCACTGAAG GGGAAGGCCC GCAATATGGA CCCGTTCACG GGGGTGAAGT TTGACAACAA GTACTTCCAG GGGCTTCTGC  TGCGTCAAGG CATGTTTGTC TCGGACCAAA CGTTGTTTGA CACGGAGGCC ACCAAAAGCA TGGTGGTGGG GTTTGCAAAT AACCAGGCTG CGTTCTTCAA GGCATTCTCA GAGTCTTTCA  TCCGCATGGG GGGAATCAAT GTGCTCACAG CCCCAGCGGG GGTCATCAGG AAAGTGTGTT TCAAGAACTA GGCTTTTGCA TCCCCAAACA CCACCTTGTG TCACTCCAAA ACTGCTGACC  GAAAAACTTC TACTCACCTA ACGTATAATC TGGCCCCCAA GAGCCGGCGG CTCACACAAA ACATTTTTCT CGTCAATCCC AGCAAGCCCA AGCAAGGCTG CCCCTTCAGT GATTCTATAA  TAAGCCGTGG ACCTTTGTGC GGTGTTGGGG CTCACTTATT CTACTTGCTA CTTGCTAACA CTTAGTTCGG GGTGATCGAG AAACGTTACA TTTATTATGG TTCTAGAATG AAATCTGCCA  TCTTGGCCGG CGTTCCCATA ACATGAGATG GGGTGTGAGT TAGTTGCAAC CATTTTTGGC GTTGGCCTAC CTTTCTCCAG TCACATTACC ACAAAAACAG AAGGTGTTAC TACATTTTTC  TGGCCTAACA GTAAATGCAG CAGAAAGATT GAGATGAACT AGGGAGGATA ATGTTACGGG CTGTGGGTGC CTCAACATAT TGACACCCCA ATTAACCAAC ATGTATGACA CTCCTTGCAT 
CCATCCATTG TGTGTTGGTG GATGTACTTG ATTATGTCAT 

Retrieve as FASTA