Entry information : CglobPrx04
Entry ID 7715
Creation 2010-11-02 (Qiang Li)
Last sequence changes 2010-12-09 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: CglobPrx04
Name CglobPrx04
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Chaetosphaeridiaceae Chaetosphaeridium
Organism Chaetosphaeridium globosum    [TaxId: 96477 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CglobPrx04
start..stop
S start..stop
CglobPrx05_CCAC0044 235 2e-79 3..161 107..265
CglobPrx06_CCAC0044 140 3e-42 1..161 92..252
SmPrx58-1_129 101 2e-26 2..161 136..294
SmPrx17-1_0 100 3e-26 1..154 146..295
Literature and cross-references CglobPrx04
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO367468.1
Protein sequence: CglobPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   172
PWM (Da):   %s   18444.36  
PI (pH):   %s   8.47
Sequence
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Send to Peroxiscan
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KLGRPDSATD NGPHKLPGAT MSAAQLIANF KSNFRLPNDV VAAKTLVLLS AGHTIGNAAC VTFNERRPVG APNVDISYGA GLRTKCPGGK ALECTKVELD TTTETVFDNQ YFNNLKQKKG 
LLTSDQNLWD GGNQVTRDLV NKYSLDNTAF LIDYMTEFIA MSQNGVTAKL TP 

Retrieve as FASTA  
Remarks Partial sequence from EST (HO367468.1). Large 5' and short 3' end are missing.
CDS
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AAGCTCGGCA GGCCTGACAG TGCCACCGAC AACGGCCCTC ACAAGCTGCC CGGCGCCACG ATGAGCGCGG CACAACTGAT TGCCAACTTC AAGAGCAACT TCAGACTTCC CAACGACGTG  GTGGCCGCGA AGACGCTCGT CCTCCTCTCC GCCGGGCACA CCATTGGAAA CGCGGCCTGT GTCACGTTCA ACGAGAGGCG TCCTGTCGGC GCGCCCAATG TGGATATCTC TTACGGTGCT  GGCCTCCGCA CGAAGTGCCC GGGAGGGAAG GCTCTGGAGT GCACCAAGGT GGAGCTGGAC ACGACCACGG AAACAGTGTT TGACAATCAG TACTTCAACA ACCTGAAGCA GAAGAAGGGC  CTCCTCACCT CCGACCAGAA CCTCTGGGAC GGCGGCAACC AAGTGACCCG GGACCTTGTC AACAAGTACT CTCTCGACAA CACCGCGTTC TTGATCGACT ACATGACCGA GTTCATTGCC 
ATGAGCCAGA ACGGCGTCAC CGCCAAGCTC ACCCCA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAGCTCGGCA GGCCTGACAG TGCCACCGAC AACGGCCCTC ACAAGCTGCC CGGCGCCACG ATGAGCGCGG CACAACTGAT TGCCAACTTC AAGAGCAACT TCAGACTTCC CAACGACGTG  GTGGCCGCGA AGACGCTCGT CCTCCTCTCC GCCGGGCACA CCATTGGAAA CGCGGCCTGT GTCACGTTCA ACGAGAGGCG TCCTGTCGGC GCGCCCAATG TGGATATCTC TTACGGTGCT  GGCCTCCGCA CGAAGTGCCC GGGAGGGAAG GCTCTGGAGT GCACCAAGGT GGAGCTGGAC ACGACCACGG AAACAGTGTT TGACAATCAG TACTTCAACA ACCTGAAGCA GAAGAAGGGC  CTCCTCACCT CCGACCAGAA CCTCTGGGAC GGCGGCAACC AAGTGACCCG GGACCTTGTC AACAAGTACT CTCTCGACAA CACCGCGTTC TTGATCGACT ACATGACCGA GTTCATTGCC  ATGAGCCAGA ACGGCGTCAC CGCCAAGCTC ACCCCATAAA CGACGGCCTC ACCACAGACG CTCTCCTACC AGCGTTTAGG TTAGCTCTAA GGCTTCGGCT TAGGGTTTAA GGCTTCTTGC  TTAGGAGTTA TGGTAGGCTT TGAAGTTCAA AGTAGGGCAA ATTCTACTCA TTATCTTGCT TAGGGTTCAA GGGTACTTCA GGGTTTCGAG TTAGGGCGAA ATGTTCGAGT TAGGGCGAAA  TGTTCGAGTT AGGGCGAAAT GTTCGGGTTA GGGAGAAATT TTCATTTTTA GAGTTGTGGG TAGTTTCGAA CTAGGGCGAA AGACTTCTTG CTTACGGTTA GGGTAGGCTT ACGGTTAGGG  TTTCGAATTA AGGCAAGAAC GGCTTCATCT CCAAGGTCAC CTTGAAGCGC CCTCCTACCA CCTCTCTTGG CTCGTGGCTC TTCCTGCAAT GAGTGGGGGG CAAAAACATG ACGACAACCT  GTAGTCTCGT GGTACCGGTG ATTGTAGGTA GTTAGGTTGG TTAGCCCGAG AGTCCATCCC TTGCCTCTAC CATGGAGTTT TGTTTCAATG GGGCTTGCTC GAGTTTTCCA ATGGTCCCCG  TCAGGACCTC AATTGTTTCT CGAGGTCTTA AATTCAAACC TCACATTCAA ACCTCACACC TCGGGAGGTC TCGAGGTTTG AGGTTTAGGT CTTAGGTTCA CGGGAGCGCA ACAAGGTGCC  TAGAATATTG TGCCTAAACT TACATTGAGC GAGCAGTGAC AAGCAACATA GTGTTCGTTC AACGTCTTAT TGTCTTGTAG CATGTCTTGT TTGTAACTAG TAATATAGAC GGATGTTGTC 
TTTTAACACT CCGTCCGTAG CAAATTGTAC CCGTAAGGGT ACAAAAACAC ACTCAAAAGG GAAATAGGCC CTAAAATATT GATAAGCATG TCTGTGTGCT TA 

Retrieve as FASTA