Entry information : CorPrx01
Entry ID 7718
Creation 2010-11-02 (Qiang Li)
Last sequence changes 2010-11-26 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-11-29 (Christophe Dunand)
Peroxidase information: CorPrx01
Name CorPrx01
Class Class III peroxidase     [Orthogroup: Prx059]*
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorPrx01
start..stop
S start..stop
CscPrx01 509 0 4..260 1..257
CscPrx02 266 5e-90 14..259 4..249
CirPrx14 181 1e-56 10..262 1..253
CirPrx07 155 3e-47 64..259 12..206
Literature and cross-references CorPrx01
Literature Timme,R.E. and Delwiche,C.F. Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra(Zygnematales) transcriptomes. BMC Plant Biol. 10 (1), 96 (2010).
EST ref. GenBank:   GW592380.1 [3' end]   GW594230.1 [3' end]
Protein sequence: CorPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   269
PWM (Da):   %s   29783.08  
PI (pH):   %s   7.53
Sequence
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Send to Peroxiscan
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LERAKTNDHS FTADLLRLVF HDCAPGHCDA SVILNKIEFN DPRNKNIEGA RRIREIKDYA SGFCGPVSWA DTIVLSTAVG ISRAGGPSME YDIYLGRADR TVKDDHVEFL PSPLEDTPAL  VDKFADIFGT SPQKAIKHLV VLSGAHTIGD AACSTFKNRR ETGAPKGQIT KRLLKQIAHE CPIDCVKAEF DITTPNIFDN AYFKNLKNKE GLLFSDQVLW TNNFTIGDQS TANYVNQFAG 
SLFDFHKAWK KSFTALTNLG RRQSLMDSM 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. The 5' end is missing. Strain="UTEX 2651".
CDS
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CTCGAGCGTG CCAAAACCAA CGATCACTCC TTCACAGCGG ACTTGCTGCG TCTGGTCTTC CACGACTGCG CCCCGGGGCA CTGCGACGCG TCCGTCATTC TAAACAAAAT CGAATTCAAT  GATCCGCGCA ACAAGAACAT CGAGGGAGCA AGGAGAATAC GCGAGATAAA GGATTACGCC TCTGGCTTCT GCGGTCCAGT CTCTTGGGCG GACACAATCG TCCTCTCGAC GGCTGTTGGC  ATATCCAGAG CTGGTGGCCC TTCGATGGAG TACGATATCT ACCTTGGAAG AGCCGATCGG ACTGTTAAGG ATGACCACGT CGAGTTTCTC CCTTCCCCGC TCGAAGACAC GCCGGCCCTC  GTGGACAAGT TTGCTGACAT ATTCGGCACG TCTCCCCAAA AGGCTATTAA GCACCTCGTG GTTCTATCTG GAGCACACAC CATCGGCGAC GCCGCATGCT CCACATTCAA GAATCGGCGA  GAAACGGGGG CTCCGAAAGG CCAGATAACA AAGCGTCTCC TCAAACAAAT AGCACATGAA TGTCCCATTG ACTGTGTCAA GGCAGAGTTT GACATCACGA CTCCGAACAT ATTCGACAAC  GCCTACTTCA AAAACTTGAA GAACAAGGAA GGGCTTCTCT TCAGCGACCA AGTCCTCTGG ACCAACAACT TCACCATTGG CGATCAGTCC ACTGCAAACT ATGTCAATCA GTTTGCGGGG 
AGCCTCTTCG ACTTTCACAA GGCCTGGAAG AAGTCGTTCA CAGCTCTCAC AAACCTCGGA CGCCGCCAAA GTTTGATGGA CTCCATGTAG 

Retrieve as FASTA  
cDNA
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GTCGTTCCCT CTCCCCCGTC TGAAAGTGGA CTACGACAAA CGGCAATGCC TGATTTTGAG GATGGGCGAG AAGTTGCAAC AGATCGATCT CGAGCGTGCC AAAACCAACG ATCACTCCTT  CACAGCGGAC TTGCTGCGTC TGGTCTTCCA CGACTGCGCC CCGGGGCACT GCGACGCGTC CGTCATTCTA AACAAAATCG AATTCAATGA TCCGCGCAAC AAGAACATCG AGGGAGCAAG  GAGAATACGC GAGATAAAGG ATTACGCCTC TGGCTTCTGC GGTCCAGTCT CTTGGGCGGA CACAATCGTC CTCTCGACGG CTGTTGGCAT ATCCAGAGCT GGTGGCCCTT CGATGGAGTA  CGATATCTAC CTTGGAAGAG CCGATCGGAC TGTTAAGGAT GACCACGTCG AGTTTCTCCC TTCCCCGCTC GAAGACACGC CGGCCCTCGT GGACAAGTTT GCTGACATAT TCGGCACGTC  TCCCCAAAAG GCTATTAAGC ACCTCGTGGT TCTATCTGGA GCACACACCA TCGGCGACGC CGCATGCTCC ACATTCAAGA ATCGGCGAGA AACGGGGGCT CCGAAAGGCC AGATAACAAA  GCGTCTCCTC AAACAAATAG CACATGAATG TCCCATTGAC TGTGTCAAGG CAGAGTTTGA CATCACGACT CCGAACATAT TCGACAACGC CTACTTCAAA AACTTGAAGA ACAAGGAAGG  GCTTCTCTTC AGCGACCAAG TCCTCTGGAC CAACAACTTC ACCATTGGCG ATCAGTCCAC TGCAAACTAT GTCAATCAGT TTGCGGGGAG CCTCTTCGAC TTTCACAAGG CCTGGAAGAA  GTCGTTCACA GCTCTCACAA ACCTCGGACG CCGCCAAAGT TTGATGGACT CCATGTAGAG GACCATGGCG AGAAACTCCA TCGTCCACTG CATCATCACT GTACAACTAC TCCTTGAAGA  AACAATGCTT CAAGAAGAAA AGGGGGAAAG GGGTCATAAA GGAGTTATCA GATCTTTGGG CACTATCTGT ACAAATCAAG CTGTAGTAGG ACGCAAAGAT GCTGCAGTAA AAACTCCATG  TTAGAGGACG AAGGCCGTAC TCCAACGCCC ATGTTTATAC CACTGTACAG CTACTTTTGG AAGAGATGAA GCTTTGAAAG AAAAGGGGGG GGGCTGGGAG GGTATGGAGT ATTAGACCTA  TGGACTCTCT ATCTGTGTTA CTTGAGCTGA CTGAAATGTG TGAAATGGCA GTGAATGCTT TTAGCTTTTC TTCCTGTCCG GTGATGGCAT GGTTGTGCTC TGTCTGCATT CTAGAGTTGC  CTTGTTTGGT TTGAGGCAGC TGACAGCACG GAGCTGCTTG AAGTTCTACA AGGAAGGGGT TCTTTTGGGA ATGTGTCGTG AGTTGGCCAC AAAGTAGTCT CGTAAACTGG AGTTGATTCA  GTCAAATCTG TCACAGGCAG GGCAAGAGTG CAAGCGAACC TTGTAACTTT CATGGTCTTT ATTGAAATTA TTAGGAGAGT AGGAATGGCT CGATGAATAT GGATGGTGTG TGGATGAACG  TCCATCTGAC GAATGTTTTC TGGGGCCTGG GGAATGGACT GAGTGAGATG TTTCAGTGAC TGAAGAAGAG AGTTGTGATG CTGCACGATC CTTAAAAAAA ACTAGGGAGC AAAATTTCAT  AACATAACGT GATAGTACGT CAGTTTTTGT TGGGGTGATA CAAAATATGC ATCGTAAGTG GAAATTACGT AACCAACAAT ATGGCTGAGC TCTGCAGTAA TATGTGAGAA TCTAGGGCTT  ATTGTTCTGG GAATTGGATT GATGTTAGTA TGTAACAATG TAATAGAGAA GCAGGCGTAA GCTAAAGAAC TGATTTGGTC TCTTCCAGAA TGTATATAGC CCCTCTCACG TTGCAGCCCG  GCATAGAACC TCCTTCACCA GAGAACAAAA CCTCTTTTGA GCATCAGTAA CCTGATTGCG TAAATGTCCA CTGGACTGCT GTGTTTACGA TGTTGAGATA TCTATCTCTG GACTTGTTCG  CATTTTCTGT GTAGTTCAAC TGCTATCCCA CGTAGTGGTC TCAGCGCCAT GTCCCATTGT GATGTTCTCC CCTGAGCCCT GACGCTCTGT TCTAACATTG ACATTTGTTA GGTGGGTTGT 
TTTCTAGGAA AAAAAAGTTA AATTAATCGC GATCTAG 

Retrieve as FASTA