Entry information : NhyPrx01
Entry ID 7741
Creation 2010-11-04 (Qiang Li)
Last sequence changes 2010-11-04 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: NhyPrx01
Name NhyPrx01
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Nitella
Organism Nitella hyalina    [TaxId: 181804 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NhyPrx01
start..stop
S start..stop
CglobPrx02 197 3e-65 1..95 210..304
CscPrx07 108 2e-30 1..90 228..317
CirPrx10 99 7e-27 1..90 222..311
CglobPrx03 92 2e-25 14..93 103..182
Literature and cross-references NhyPrx01
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO557498.1
Protein sequence: NhyPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   95
PWM (Da):   %s   10701.4  
PI (pH):   %s   9.86
Sequence
Send to BLAST
Send to Peroxiscan
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TVADIELVNQ TFQDPTTNTK FDNGYYKALL TRRGMFTSDQ VLYDDFRSRG LVKLFALNQD AFFASFKYSM VRMGNINALT GNKGIIRKVC FSNSA 

Retrieve as FASTA  
Remarks Partial sequence from EST (HO557498). Large 5'end is missing.
CDS
Send to BLAST
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ACAGTCGCCG ACATCGAGCT GGTGAACCAA ACGTTTCAGG ACCCCACCAC GAACACCAAG TTCGACAACG GTTACTACAA GGCGCTCCTC ACAAGGAGGG GGATGTTCAC GAGCGACCAG  GTGTTATATG ACGACTTCCG CTCAAGGGGG CTCGTGAAAC TGTTTGCTCT GAACCAGGAT GCCTTTTTTG CCTCCTTCAA ATATTCAATG GTGCGCATGG GCAACATCAA CGCACTCACG 
GGAAATAAGG GGATTATCCG CAAGGTCTGC TTCAGCAATT CAGCATAG 

Retrieve as FASTA  
cDNA
Send to BLAST
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TTGTCGCCGC ACCGACCACA GTCGCCGACA TCGAGCTGGT GAACCAAACG TTTCAGGACC CCACCACGAA CACCAAGTTC GACAACGGTT ACTACAAGGC GCTCCTCACA AGGAGGGGGA  TGTTCACGAG CGACCAGGTG TTATATGACG ACTTCCGCTC AAGGGGGCTC GTGAAACTGT TTGCTCTGAA CCAGGATGCC TTTTTTGCCT CCTTCAAATA TTCAATGGTG CGCATGGGCA 
ACATCAACGC ACTCACGGGA AATAAGGGGA TTATCCGCAA GGTCTGCTTC AGCAATTCAG CATAGTAACA ACGGGTTCTA GGGGTTAGGA 

Retrieve as FASTA