Entry information : PmargPrx02
Entry ID 7752
Creation 2010-11-04 (Qiang Li)
Last sequence changes 2010-12-22 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: PmargPrx02
Name PmargPrx02
Class Class III peroxidase     [Orthogroup: Prx073]*
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Peniaceae Penium
Organism Penium margaritaceum    [TaxId: 102169 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmargPrx02
start..stop
S start..stop
PmargPrx05 497 8e-179 25..329 51..357
RobtPrx02 300 7e-102 29..324 8..296
PmargPrx06 299 1e-101 28..324 1..293
PmargPrx04 291 3e-100 148..325 1..179
Literature and cross-references PmargPrx02
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO594770.1   HO613095.1   HO651008.1
Protein sequence: PmargPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (311)
PWM (Da):   %s   35440.07 (33607.0)  
PI (pH):   %s   8.87 (8.87) Peptide Signal:   %s   cut: 23 range:19-329
Sequence
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Send to Peroxiscan
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MLLVLQLTAL AVVTQAPATS MASLLRADYY ASSCPSVGKI VADEVKNAYD KDDTVAPALL RLHFHDCFVQ GCDASVLLDS PRGATSATKS EKDADSNFSL SAFDVVDNIK ERLEKACPAI  VSCADLLALA ARKAIRLSGG PVISTRLGRR DGKTSMAKKA EKFLPAATLN TSGLIDNFAK VGLELVDVVT LSGAHTFGHG HCKSVANRLP PNQDPTMSRE LHSKLTKTCY QGTKADPMAE 
FANDLRTPVK FDNQYYQNIL AGNAAFTSDM ALLYDKRSIP YVRRYAQSQN AFFNQFKLSM VKMGDISPLT GTQGEIRRVC SRVNGASPK 

Retrieve as FASTA  
Remarks Partial sequence from ESTs (HO651008.1, HO613095.1, HO594770.1). 5' end is missing.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTGCGCCGAC TTGCTTGCCC TCGCCGCACG CAAGGCCATT CGCCTGAGCG GAGGTCCAGT GATTTCCACG CGTCTGGGAA GGCGCGATGG CAAGACGTCG ATGGCGAAGA AGGCGGAGAA  ATTCCTCCCT GCAGCCACTC TGAATACGTC CGGCCTCATC GACAACTTTG CGAAAGTGGG CCTCGAACTC GTCGACGTCG TCACGCTCTC TGGTGCGCAC ACCTTCGGGC ACGGCCACTG  CAAGAGCGTG GCGAACCGGC TGCCTCCCAA CCAGGACCCC ACCATGTCGC GCGAGCTGCA CTCGAAGCTC ACCAAGACTT GCTACCAGGG CACCAAGGCC GACCCCATGG CCGAGTTTGC  CAACGACCTG CGCACGCCCG TCAAGTTTGA CAACCAGTAC TACCAGAACA TCCTGGCAGG CAACGCCGCA TTCACGTCCG ACATGGCGCT GCTGTATGAC AAGCGCTCGA TTCCATATGT  GCGCCGGTAC GCACAGAGCC AGAACGCCTT CTTCAACCAG TTCAAGCTGT CGATGGTGAA GATGGGCGAT ATCTCCCCTC TCACATCCAC CCAGGGTGAG ATCCGTCGCG TCTGCAGCAG  AGTCAATGGG GCATCCCCCA AGTAAGGCAG CAGGCTAGGA GGTGGAGACA TAACGGCTTT TGTGCCTTCT CCACGTGAGC AACCAGCCAA AGGATTCTCT CGTGGCAGCT GCTCAGGAGC  ATAAAGTGAA ACCAGGCTTT TCCTTGGACG TTGTGGTGGA CGCGTGGGTG GTCATGACAG CAGGACAATG CGGCACACCA CTATGCCAGA CAGCGAATGG AGTACATAAG GAGACGAATA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTGCTTG TGCTGCAGCT CACCGCACTG GCTGTGGTTA CACAGGCGCC AGCCACATCC ATGGCGTCAC TCCTCCGCGC GGACTACTAC GCGAGCTCTT GCCCCAGCGT CGGCAAAATT  GTGGCGGACG AAGTTAAGAA CGCGTACGAC AAAGACGACA CCGTTGCGCC GGCGCTGCTG CGCCTGCATT TCCACGACTG CTTCGTGCAG GGCTGCGACG CGTCGGTTCT GTTGGACTCA  CCGCGCGGCG CGACGAGCGC GACCAAGTCG GAGAAGGACG CAGACAGCAA CTTTTCGCTG TCAGCGTTTG ACGTGGTCGA TAACATCAAG GAGCGGCTGG AGAAGGCCTG CCCCGCTATA  GTGTCGTGCG CCGACTTGCT TGCCCTCGCC GCACGCAAGG CCATTCGCCT GAGCGGAGGT CCAGTGATTT CCACGCGTCT GGGAAGGCGC GATGGCAAGA CGTCGATGGC GAAGAAGGCG  GAGAAATTCC TCCCTGCAGC CACTCTGAAT ACGTCCGGCC TCATCGACAA CTTTGCGAAA GTGGGCCTCG AACTCGTCGA CGTCGTCACG CTCTCTGGTG CGCACACCTT CGGGCACGGC  CACTGCAAGA GCGTGGCGAA CCGGCTGCCT CCCAACCAGG ACCCCACCAT GTCGCGCGAG CTGCACTCGA AGCTCACCAA GACTTGCTAC CAGGGCACCA AGGCCGACCC CATGGCCGAG  TTTGCCAACG ACCTGCGCAC GCCCGTCAAG TTTGACAACC AGTACTACCA GAACATCCTG GCAGGCAACG CCGCATTCAC GTCCGACATG GCGCTGCTGT ATGACAAGCG CTCGATTCCA  TATGTGCGCC GGTACGCACA GAGCCAGAAC GCCTTCTTCA ACCAGTTCAA GCTGTCGATG GTGAAGATGG GCGATATCTC CCCTCTCACA GGCACCCAGG GTGAGATCCG TCGCGTCTGC 
AGCAGAGTCA ATGGGGCATC CCCCAAGTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTCACTCTTT ACCTCCCGAG TGCTGTCGTC CAAGGCAGGG TGCAACCGCT GCAGTGAGGC ACTGACGCCA TGGATCATTT TGTGCTTCCG TCCGTCGCCC CTCGTCGTCA GCCGCTCCTG  TCGATGTTGC TTGTGCTGCA ATGTTGCTTG TGCTGCAGCT CACCGCACTG GCTGTGGTTA CACAGGCGCC AGCCACATCC ATGGCGTCAC TCCTCCGCGC GGACTACTAC GCGAGCTCTT  GCCCCAGCGT CGGCAAAATT GTGGCGGACG AAGTTAAGAA CGCGTACGAC AAAGACGACA CCGTTGCGCC GGCGCTGCTG CGCCTGCATT TCCACGACTG CTTCGTGCAG GGCTGCGACG  CGTCGGTTCT GTTGGACTCA CCGCGCGGCG CGACGAGCGC GACCAAGTCG GAGAAGGACG CAGACAGCAA CTTTTCGCTG TCAGCGTTTG ACGTGGTCGA TAACATCAAG GAGCGGCTGG  AGAAGGCCTG CCCCGCTATA GTGTCGTGCG CCGACTTGCT TGCCCTCGCC GCACGCAAGG CCATTCGCCT GAGCGGAGGT CCAGTGATTT CCACGCGTCT GGGAAGGCGC GATGGCAAGA  CGTCGATGGC GAAGAAGGCG GAGAAATTCC TCCCTGCAGC CACTCTGAAT ACGTCCGGCC TCATCGACAA CTTTGCGAAA GTGGGCCTCG AACTCGTCGA CGTCGTCACG CTCTCTGGTG  CGCACACCTT CGGGCACGGC CACTGCAAGA GCGTGGCGAA CCGGCTGCCT CCCAACCAGG ACCCCACCAT GTCGCGCGAG CTGCACTCGA AGCTCACCAA GACTTGCTAC CAGGGCACCA  AGGCCGACCC CATGGCCGAG TTTGCCAACG ACCTGCGCAC GCCCGTCAAG TTTGACAACC AGTACTACCA GAACATCCTG GCAGGCAACG CCGCATTCAC GTCCGACATG GCGCTGCTGT  ATGACAAGCG CTCGATTCCA TATGTGCGCC GGTACGCACA GAGCCAGAAC GCCTTCTTCA ACCAGTTCAA GCTGTCGATG GTGAAGATGG GCGATATCTC CCCTCTCACA GGCACCCAGG  GTGAGATCCG TCGCGTCTGC AGCAGAGTCA ATGGGGCATC CCCCAAGTAA CAGGCTAGGA GGTGGAGACA TAACGGCTTT TGTGCCTTCT CCACGTGAGC AACCAGCCAA AGGATTCTCT  CGTGGCAGCT GCTCAGGAGC ATAAAGTGAA ACCAGGCTTT TCCTTGGACG TTGTGGTGGA CGCGTGGGTG GTCATGACAG CAGGACAATG CGGCACACCA CTATGCCAGA CAGCGAATGG 
AGTACATAAG GAGACGAATA A 

Retrieve as FASTA