Entry information : SpraAPx03
Entry ID 7758
Creation 2010-11-05 (Qiang Li)
Last sequence changes 2010-12-23 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-13 (Christophe Dunand)
Peroxidase information: SpraAPx03
Name SpraAPx03
Class Ascorbate peroxidase    [Orthogroup: APx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Zygnemataceae Spirogyra
Organism Spirogyra pratensis    [TaxId: 332123 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpraAPx03
start..stop
S start..stop
SsAPx03_AU1 529 0 1..302 1..300
McalAPx04 468 1e-168 1..302 1..295
SmAPx02-1_0 444 3e-159 1..302 1..299
SmAPx02-2_60 444 4e-159 1..302 1..299
Literature and cross-references SpraAPx03
Literature Timme,R.E. and Delwiche,C.F. Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra(Zygnematales) transcriptomes. BMC Plant Biol. 10 (1), 96 (2010).
EST ref. GenBank:   GW600683.1
Protein sequence: SpraAPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   302
PWM (Da):   %s   33209.89 Transmb domain:   %s   o271-293i
PI (pH):   %s   8.2
Sequence
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Send to Peroxiscan
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MQAPTVDESY LKAIDGAKRN LRALIAEQNC APLMLRLAFH DAGTYDINTR TGGPNGSIRS DKEFSHPANA GMKIAIDLLE EIKSKFPKIT YADLYQLAGI VAVEVTGGPQ IEFVPGRKDS  LAVTSEGRLP DATKGSRHLR DVFYRMGLND KEIVALSGAH TLGRAHKERS GFEGQWTSQP LKFDNTYFRE LLKGDSEGLL KLPTDKTLAE DPSFRSYVEK YAMDEDAFFR DYAEAHKKMS 
ELGCHDTSPA FWKKRSSAES AARSNSIQAF TILAQSAVGF AATAIVLAFG YAYEMKRKTA LK 

Retrieve as FASTA  
Remarks Complete sequence from EST. Strain="UTEX 921".
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAAGCCC CTACTGTGGA TGAATCTTAC TTAAAAGCCA TTGATGGTGC GAAAAGGAAT CTCCGAGCTC TCATAGCTGA ACAGAATTGC GCACCTCTCA TGCTACGTCT CGCTTTTCAT  GATGCCGGAA CGTATGACAT AAATACTCGA ACTGGAGGTC CTAATGGTTC AATTCGAAGT GACAAAGAAT TTTCTCATCC AGCAAACGCT GGAATGAAAA TCGCAATCGA TCTTTTAGAG  GAAATTAAAT CAAAATTTCC AAAAATCACT TATGCAGACC TTTATCAGCT TGCCGGTATA GTTGCTGTCG AAGTGACAGG AGGACCTCAA ATAGAATTTG TTCCTGGACG TAAAGATTCT  TTGGCTGTCA CTTCTGAAGG ACGCCTTCCT GATGCAACTA AAGGCTCTCG TCATTTACGA GACGTTTTTT ATCGCATGGG TTTGAATGAC AAGGAGATTG TCGCCCTATC CGGAGCTCAC  ACGCTTGGGA GGGCTCACAA AGAACGTTCT GGATTTGAAG GCCAATGGAC GAGCCAACCA TTGAAATTTG ATAACACTTA TTTCAGAGAA TTGCTTAAAG GAGATTCAGA AGGTTTGCTC  AAGCTACCAA CTGACAAAAC ATTGGCAGAA GATCCTTCTT TTCGTTCGTA TGTGGAGAAA TATGCAATGG ATGAAGATGC ATTCTTTCGC GATTATGCAG AGGCGCATAA GAAAATGTCC  GAATTAGGAT GCCATGACAC TTCTCCTGCA TTCTGGAAAA AGAGATCGAG TGCAGAAAGT GCAGCAAGGT CCAATTCCAT TCAAGCTTTT ACAATTCTGG CCCAAAGCGC GGTGGGTTTC 
GCAGCTACGG CCATCGTCCT GGCCTTTGGA TACGCCTACG AAATGAAACG AAAAACGGCT TTAAAATGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATCTTTAGGA AAATTTCACC ATGCAAGCCC CTACTGTGGA TGAATCTTAC TTAAAAGCCA TTGATGGTGC GAAAAGGAAT CTCCGAGCTC TCATAGCTGA ACAGAATTGC GCACCTCTCA  TGCTACGTCT CGCTTTTCAT GATGCCGGAA CGTATGACAT AAATACTCGA ACTGGAGGTC CTAATGGTTC AATTCGAAGT GACAAAGAAT TTTCTCATCC AGCAAACGCT GGAATGAAAA  TCGCAATCGA TCTTTTAGAG GAAATTAAAT CAAAATTTCC AAAAATCACT TATGCAGACC TTTATCAGCT TGCCGGTATA GTTGCTGTCG AAGTGACAGG AGGACCTCAA ATAGAATTTG  TTCCTGGACG TAAAGATTCT TTGGCTGTCA CTTCTGAAGG ACGCCTTCCT GATGCAACTA AAGGCTCTCG TCATTTACGA GACGTTTTTT ATCGCATGGG TTTGAATGAC AAGGAGATTG  TCGCCCTATC CGGAGCTCAC ACGCTTGGGA GGGCTCACAA AGAACGTTCT GGATTTGAAG GCCAATGGAC GAGCCAACCA TTGAAATTTG ATAACACTTA TTTCAGAGAA TTGCTTAAAG  GAGATTCAGA AGGTTTGCTC AAGCTACCAA CTGACAAAAC ATTGGCAGAA GATCCTTCTT TTCGTTCGTA TGTGGAGAAA TATGCAATGG ATGAAGATGC ATTCTTTCGC GATTATGCAG  AGGCGCATAA GAAAATGTCC GAATTAGGAT GCCATGACAC TTCTCCTGCA TTCTGGAAAA AGAGATCGAG TGCAGAAAGT GCAGCAAGGT CCAATTCCAT TCAAGCTTTT ACAATTCTGG  CCCAAAGCGC GGTGGGTTTC GCAGCTACGG CCATCGTCCT GGCCTTTGGA TACGCCTACG AAATGAAACG AAAAACGGCT TTAAAATGAA AGCGAAATTG AGAATGTTCA CGTTTTGCTG  GTTGGGTTTT TAAAGATTTG GGTTATAGGG GCAGCAATGT TTGGTTGAAT TTTCTAAAAT TCGAATGCGT ATTTTCATAA AAATGAACTG TTTGCTTGCT TCTGGTCACT TAAGCTCATC 
GTTTTTT 

Retrieve as FASTA