Entry information : PmargPrx06
Entry ID 7762
Creation 2010-11-08 (Qiang Li)
Last sequence changes 2010-12-23 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: PmargPrx06
Name PmargPrx06
Class Class III peroxidase     [Orthogroup: Prx076]*
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Peniaceae Penium
Organism Penium margaritaceum    [TaxId: 102169 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmargPrx06
start..stop
S start..stop
PmargPrx03 364 1e-128 1..232 1..233
PmargPrx05 323 9e-111 1..293 54..350
PmargPrx02 299 1e-101 1..293 28..324
RobtPrx02 277 2e-93 2..293 8..296
Literature and cross-references PmargPrx06
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO596283.1
Protein sequence: PmargPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   293
PWM (Da):   %s   30892.88  
PI (pH):   %s   8.95
Sequence
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Send to Peroxiscan
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NFYQSTCPRA SSIVAAGVAK AYKKSSDISA PLLLLQFLDC RVQGCDASLL LDTKGGKNGE KAALSAILDD AALDLVDTIK GQLESACPGV VSCADVLALA AREAVHLAGG PYISVRVGRR  DSKSSSAAKF KSGFPGATSN ASTLIANFAK VGLGCRDLVA LSGAHTLGKA HCSSVENRLA PNTDPTMNSG LRKDLNQQCG APDVDADVTV DIDLRTPLKF DNKYFVNIVE GKGLLTSDQT 
LLSDSRTRRY VRLYAQNQNA FFSQFKTSMV KMGAIQVLTG STGEIRRNCR VAN 

Retrieve as FASTA  
Remarks Partial sequence from EST (HO596283.1).
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AACTTCTACC AGTCGACGTG CCCACGCGCC AGCAGCATAG TGGCTGCCGG CGTCGCTAAG GCCTACAAGA AGAGCTCCGA CATCTCAGCG CCTCTCCTCC TCCTGCAGTT CTTGGACTGC  CGCGTGCAGG GCTGCGATGC GTCCCTGCTT TTGGACACCA AGGGCGGGAA GAATGGCGAG AAGGCGGCCC TGAGTGCCAT TCTGGACGAC GCGGCGCTTG ACCTGGTGGA CACAATCAAG  GGACAGCTGG AGTCAGCGTG CCCTGGCGTG GTGTCGTGCG CCGACGTGCT CGCCCTCGCT GCGCGCGAGG CCGTGCATCT GGCTGGAGGG CCATACATTT CAGTGCGTGT GGGGCGGCGA  GACAGCAAGT CGTCGTCCGC TGCAAAGTTC AAGTCTGGCT TTCCTGGAGC CACGTCCAAC GCTTCCACTC TGATCGCCAA CTTTGCGAAA GTGGGATTGG GGTGCCGAGA CCTCGTCGCG  CTCTCTGGCG CTCACACCCT TGGCAAGGCG CACTGCTCTA GCGTGGAGAA CCGGCTGGCT CCCAACACAG ACCCCACCAT GAACAGTGGA CTGCGCAAGG ACCTCAACCA GCAGTGCGGT  GCCCCAGATG TGGACGCTGA TGTGACCGTG GACATCGACC TGCGCACACC CTTGAAGTTT GACAACAAGT ACTTTGTGAA CATTGTGGAG GGCAAGGGCC TCCTCACCTC CGACCAGACG  CTTCTCTCGG ACAGCCGCAC TCGCCGCTAT GTGCGTCTGT ACGCGCAGAA CCAGAACGCC TTCTTCAGCC AGTTCAAGAC GTCCATGGTG AAGATGGGTG CCATCCAGGT GCTCACTGGC 
AGCACCGGTG AGATCCGCCG CAACTGCCGT GTTGCTAACT AA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGCCAACTT CTACCAGTCG ACGTGCCCAC GCGCCAGCAG CATAGTGGCT GCCGGCGTCG CTAAGGCCTA CAAGAAGAGC TCCGACATCT CAGCGCCTCT CCTCCTCCTG CAGTTCTTGG  ACTGCCGCGT GCAGGGCTGC GATGCGTCCC TGCTTTTGGA CACCAAGGGC GGGAAGAATG GCGAGAAGGC GGCCCTGAGT GCCATTCTGG ACGACGCGGC GCTTGACCTG GTGGACACAA  TCAAGGGACA GCTGGAGTCA GCGTGCCCTG GCGTGGTGTC GTGCGCCGAC GTGCTCGCCC TCGCTGCGCG CGAGGCCGTG CATCTGGCTG GAGGGCCATA CATTTCAGTG CGTGTGGGGC  GGCGAGACAG CAAGTCGTCG TCCGCTGCAA AGTTCAAGTC TGGCTTTCCT GGAGCCACGT CCAACGCTTC CACTCTGATC GCCAACTTTG CGAAAGTGGG ATTGGGGTGC CGAGACCTCG  TCGCGCTCTC TGGCGCTCAC ACCCTTGGCA AGGCGCACTG CTCTAGCGTG GAGAACCGGC TGGCTCCCAA CACAGACCCC ACCATGAACA GTGGACTGCG CAAGGACCTC AACCAGCAGT  GCGGTGCCCC AGATGTGGAC GCTGATGTGA CCGTGGACAT CGACCTGCGC ACACCCTTGA AGTTTGACAA CAAGTACTTT GTGAACATTG TGGAGGGCAA GGGCCTCCTC ACCTCCGACC  AGACGCTTCT CTCGGACAGC CGCACTCGCC GCTATGTGCG TCTGTACGCG CAGAACCAGA ACGCCTTCTT CAGCCAGTTC AAGACGTCCA TGGTGAAGAT GGGTGCCATC CAGGTGCTCA  CTGGCAGCAC CGGTGAGATC CGCCGCAACT GCCGTGTTGC TAACTAATTT TATGCATGGA CACAGCGCAG GAACAAAGGT CACGTGACAA CGATGCCCAC AAGTTCAGCG CTTGTGCATC 
TAGAACCTGA CTGCCTCCAT GGACAAGCTT GATGTCAAGG TTTTCAGTGG GCATAAAACG GGGACAATGT TACAAGAATG TCCT 

Retrieve as FASTA