Entry information : PmargPrx05
Entry ID 7764
Creation 2010-11-08 (Qiang Li)
Last sequence changes 2010-11-08 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: PmargPrx05
Name PmargPrx05
Class Class III peroxidase    [Orthogroup: Prx094]
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Peniaceae Penium
Organism Penium margaritaceum    [TaxId: 102169 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmargPrx05
start..stop
S start..stop
PmargPrx02 508 0 19..357 1..329
PmargPrx06 324 6e-111 54..350 1..293
PmargPrx04 317 1e-109 174..357 1..185
RobtPrx01 304 4e-103 55..350 10..298
Literature and cross-references PmargPrx05
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO586148.1   HO619319.1
Protein sequence: PmargPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (325)
PWM (Da):   %s   38542.22 (35048.2)  
PI (pH):   %s   10.3 (10.23) Peptide Signal:   %s   cut: 33 range:33-357
Sequence
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Send to Peroxiscan
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MEPFARTSVA HSRQPLLTLL LVPQLLTLVV VATAPAAGSE AAAAHAAKGR LRADYYEHTC PNAIKIVADE VRKAFHKSSD VAAPLLRLHF HDCFVQGCDA SVLLDSPRGA TRTGKAEKDA  PDNFSLSAFD VVDKIKRRLE KACPAIVSCA DLLAVAAREA IRLAGGPRIP ARLGRRDGLS SMAAKAQIFL PAATLNTSGL IANFAKVGLD LVDVVTLSGA HTIGQGHCKS VANRLAPNYD 
PTMSRKLRSK LTKTCYHGAK PDPMAVFSND LRTPVKFDNQ YYKNILAGNA AFTSDMALLY DRRSKPYVRL YAQNQKAFFN QFKLSMLKMG NIRTLTGTQG EIRLTCHKVN GAHTSPK 

Retrieve as FASTA  
Remarks Complete sequence from ESTs (HO586148.1, HO619319.1).
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGCCCT TTGCGCGCAC GTCCGTGGCG CATAGTCGTC AGCCGCTGCT GACGCTGCTG CTCGTGCCGC AGCTTCTCAC ACTGGTGGTG GTAGCAACGG CGCCAGCCGC AGGCTCTGAA  GCCGCCGCCG CCCACGCCGC CAAAGGCCGC CTCCGTGCGG ACTACTACGA GCACACGTGC CCCAACGCCA TCAAGATTGT GGCGGACGAA GTCAGGAAGG CGTTCCACAA GAGCTCCGAC  GTCGCAGCGC CTCTGCTGCG CCTGCACTTT CACGACTGCT TCGTACAGGG CTGCGACGCG TCGGTGCTGC TGGACTCGCC GCGCGGCGCG ACGCGCACGG GTAAGGCAGA GAAGGACGCG  CCTGACAACT TTTCGCTCTC AGCTTTTGAC GTGGTGGACA AGATCAAGAG GCGGCTGGAG AAGGCGTGCC CCGCCATAGT CTCGTGCGCC GACTTGCTCG CCGTCGCCGC GCGCGAGGCC  ATTCGCCTCG CTGGAGGGCC AAGAATTCCT GCGCGTTTGG GAAGACGCGA CGGGTTGTCA TCGATGGCGG CCAAGGCACA AATCTTCCTC CCTGCAGCCA CTCTGAACAC GTCCGGCCTC  ATCGCCAACT TTGCGAAAGT GGGCCTCGAC CTCGTCGACG TCGTCACTCT CTCTGGTGCG CACACCATCG GGCAAGGCCA CTGCAAGAGC GTCGCGAACC GTCTGGCGCC CAACTATGAC  CCCACCATGT CACGCAAGCT GCGCTCTAAG CTCACCAAGA CGTGCTACCA TGGCGCCAAA CCCGACCCCA TGGCGGTGTT TTCCAACGAC CTGCGTACGC CCGTCAAGTT CGACAACCAG  TACTACAAGA ACATCCTGGC AGGCAACGCC GCATTCACAT CGGACATGGC ACTGCTTTAT GACCGCCGCT CAAAGCCCTA TGTGCGTCTT TACGCTCAGA ACCAGAAAGC TTTCTTTAAC 
CAGTTCAAGC TCTCGATGCT GAAGATGGGC AACATCCGCA CACTCACAGG CACCCAGGGT GAGATCCGTC TGACCTGCCA CAAAGTCAAT GGGGCTCACA CGTCCCCCAA GTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCGTCTTG TTTGTCGTGA ATTGGCCTCG AGCCAGCGGG CATCGGGTCC ACTGGGTACA AGAAGACGGC GATAACGCTT CACTTTGTGA GAATTCCCGG GATCAGACCT TGGCATTCTC  CCCTCATCCA CACCTCGTCG TCGCGGTCCG TCTGCGCTCT CTATCTCGCC TTACCTAGTG CCGAGGACTG AAGTGAGACA CAGTTGATAT GGAGCCCTTT GCGCGCACGT CCGTGGCGCA  TAGTCGTCAG CCGCTGCTGA CGCTGCTGCT CGTGCCGCAG CTTCTCACAC TGGTGGTGGT AGCAACGGCG CCAGCCGCAG GCTCTGAAGC CGCCGCCGCC CACGCCGCCA AAGGCCGCCT  CCGTGCGGAC TACTACGAGC ACACGTGCCC CAACGCCATC AAGATTGTGG CGGACGAAGT CAGGAAGGCG TTCCACAAGA GCTCCGACGT CGCAGCGCCT CTGCTGCGCC TGCACTTTCA  CGACTGCTTC GTACAGGGCT GCGACGCGTC GGTGCTGCTG GACTCGCCGC GCGGCGCGAC GCGCACGGGT AAGGCAGAGA AGGACGCGCC TGACAACTTT TCGCTCTCAG CTTTTGACGT  GGTGGACAAG ATCAAGAGGC GGCTGGAGAA GGCGTGCCCC GCCATAGTCT CGTGCGCCGA CTTGCTCGCC GTCGCCGCGC GCGAGGCCAT TCGCCTCGCT GGAGGGCCAA GAATTCCTGC  GCGTTTGGGA AGACGCGACG GGTTGTCATC GATGGCGGCC AAGGCACAAA TCTTCCTCCC TGCAGCCACT CTGAACACGT CCGGCCTCAT CGCCAACTTT GCGAAAGTGG GCCTCGACCT  CGTCGACGTC GTCACTCTCT CTGGTGCGCA CACCATCGGG CAAGGCCACT GCAAGAGCGT CGCGAACCGT CTGGCGCCCA ACTATGACCC CACCATGTCA CGCAAGCTGC GCTCTAAGCT  CACCAAGACG TGCTACCATG GCGCCAAACC CGACCCCATG GCGGTGTTTT CCAACGACCT GCGTACGCCC GTCAAGTTCG ACAACCAGTA CTACAAGAAC ATCCTGGCAG GCAACGCCGC  ATTCACATCG GACATGGCAC TGCTTTATGA CCGCCGCTCA AAGCCCTATG TGCGTCTTTA CGCTCAGAAC CAGAAAGCTT TCTTTAACCA GTTCAAGCTC TCGATGCTGA AGATGGGCAA  CATCCGCACA CTCACAGGCA CCCAGGGTGA GATCCGTCTG ACCTGCCACA AAGTCAATGG GGCTCACACG TCCCCCAAGT AAGGAAACAG GTGACGGTGG AGACAGATAG ACATTTCTGC  CTCCCCTTCA CACGAGGGAT TCTCTACGAG ATTCTCTCAG GGCCACCAGA TAAGGTACCC GGTCTTGAGG TGGGTTTGGG AGAGATGGTG AGAATAATGG TAACCACAGC TACTTACCTG  CTTTAGAAAC ATGCAATCTG CATGTGAGCA ACCTCTTCCT TGATAACAGC AAGGATCTTT CTCTTGGGAG TGGAAATGAA CGTATCTACA TGTGACTACA GCAAGTTTGT GTATCCATCT 
TCTACAGACC TTAATTAATC GCGATCTAG 

Retrieve as FASTA