Entry information : NhyPrx02
Entry ID 7768
Creation 2010-11-08 (Qiang Li)
Last sequence changes 2010-12-21 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2012-06-14 (Qiang Li)
Peroxidase information: NhyPrx02
Name NhyPrx02
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Nitella
Organism Nitella hyalina    [TaxId: 181804 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NhyPrx02
start..stop
S start..stop
NhyPrx07 196 2e-62 6..241 49..272
NhyPrx03 190 6e-60 2..241 82..310
NhyPrx04 177 1e-56 60..236 1..172
NhyPrx08 161 8e-50 27..235 1..214
Literature and cross-references NhyPrx02
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO574220.1 [3' end]
Protein sequence: NhyPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27765  
PI (pH):   %s   6.94
Sequence
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Send to Peroxiscan
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RLVEIIRVRV AKECNVIPTA ADTIAAAASA ALFFSGVRPD SASYGFRLGR RDVDPREPAD DPLSLPNPAG PFRQALKTLT AFGLSVEDAT VFSIGGHSMG SSRCLNFVPR LNLGYNERHG  ENRSMCGHPL DPTLEPDRAC ALTKVCRDPD STDDEVHFDQ TPFVLDNLYF RMLLDHKGLL LTDQAFEADP TTAHLVRKYA FATNNYLRHK FLKVFVKFLL INVNGPTTAP PQQYYYYNDS 
STDHIVPRHE 

Retrieve as FASTA  
Remarks Partial sequence from EST (HO574220.1). 5' end is missing.
CDS
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CGCTTGGTGG AGATCATTAG AGTCAGGGTA GCAAAGGAGT GCAACGTCAT CCCCACCGCA GCGGACACCA TAGCCGCGGC TGCCAGCGCC GCGTTGTTCT TCTCTGGCGT CCGCCCAGAT  TCCGCCAGCT ACGGGTTTCG TCTTGGCCGG CGCGATGTCG ACCCGCGCGA GCCTGCGGAC GACCCGCTCA GTCTTCCCAA TCCCGCCGGA CCGTTCCGCC AGGCTCTGAA GACGCTGACG  GCGTTCGGCT TGAGCGTGGA AGACGCAACT GTGTTCAGCA TCGGCGGGCA CAGCATGGGC TCGTCGCGGT GTCTCAATTT CGTGCCTCGA CTCAATCTTG GCTACAACGA GCGCCACGGA  GAGAACCGCT CGATGTGCGG GCATCCGCTC GATCCGACGC TTGAGCCCGA TCGGGCATGC GCGTTGACCA AAGTCTGTCG CGACCCCGAC TCCACCGACG ACGAGGTGCA CTTCGACCAG  ACGCCGTTTG TTCTGGATAA CTTGTACTTC CGGATGCTCC TAGATCACAA AGGCTTGCTC CTCACGGATC AGGCGTTTGA GGCGGATCCC ACGACAGCGC ATCTTGTCCG CAAGTACGCC  TTCGCAACCA ACAACTACCT CCGACACAAA TTCCTCAAGG TCTTCGTCAA GTTTCTGCTC ATCAACGTCA ACGGACCTAC CACGGCACCG CCCCAGCAAT ACTATTACTA CAACGATTCC 
AGTACCGATC ACATTGTCCC CCGGCATGAA TAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGCTCGCTT GGTGGAGATC ATTAGAGTCA GGGTAGCAAA GGAGTGCAAC GTCATCCCCA CCGCAGCGGA CACCATAGCC GCGGCTGCCA GCGCCGCGTT GTTCTTCTCT GGCGTCCGCC  CAGATTCCGC CAGCTACGGG TTTCGTCTTG GCCGGCGCGA TGTCGACCCG CGCGAGCCTG CGGACGACCC GCTCAGTCTT CCCAATCCCG CCGGACCGTT CCGCCAGGCT CTGAAGACGC  TGACGGCGTT CGGCTTGAGC GTGGAAGACG CAACTGTGTT CAGCATCGGC GGGCACAGCA TGGGCTCGTC GCGGTGTCTC AATTTCGTGC CTCGACTCAA TCTTGGCTAC AACGAGCGCC  ACGGAGAGAA CCGCTCGATG TGCGGGCATC CGCTCGATCC GACGCTTGAG CCCGATCGGG CATGCGCGTT GACCAAAGTC TGTCGCGACC CCGACTCCAC CGACGACGAG GTGCACTTCG  ACCAGACGCC GTTTGTTCTG GATAACTTGT ACTTCCGGAT GCTCCTAGAT CACAAAGGCT TGCTCCTCAC GGATCAGGCG TTTGAGGCGG ATCCCACGAC AGCGCATCTT GTCCGCAAGT  ACGCCTTCGC AACCAACAAC TACCTCCGAC ACAAATTCCT CAAGGTCTTC GTCAAGTTTC TGCTCATCAA CGTCAACGGA CCTACCACGG CACCGCCCCA GCAATACTAT TACTACAACG  ATTCCAGTAC CGATCACATT GTCCCCCGGC ATGAATAAAT ATATCTCACT AACTTATTGT TTTGTTCTCG CCAAACTATG GGTCGTCGTA TTCGTTCAAG CAGTCTTCCG TTTACAGTGT  AGTCAATGCA TGTTCAGTTT GCAACGGAAT TGTGCAACGA AATTGTGCAA CGAAATTGTG CAACGGAATT GTTTGACTGT TGACGGGGGG ACCTGGACCA TCGTCAACCT ACCTTGACCG  TTGCAAGTCT TATCAGCGGT ATGAAATGAT GTTGTTGTCG ATGATTAAAA CACCGACCTC TCATCAGTGC TAAGCCGTCC GAGTTGCGCA CCCAATGAAA TGACGTTGTT GATCAACACG  TGGATCAACG GTGCGGAGGT CCAGTCACTA ATCCTTCGTA AGCACGGAAT ATCGGCTCCA GTGTCCCAGT GGGTCTGCTG ACGTGGCAGG AACACCGTGA CGTGGAGAGG ACTGCAGAGG  CATTGGCGTT GTCACGAGAC ATACTAGGAT ATGCCCTGCA CCGATATTAC TGATTCATAT CAACAGTTGC AGCCAGTTCA TTATGAAATT CATACTATAA TTAATGCCGA GTTCATTTTC  TTACAAAAAA TTTGCAATTT CTATTTGTGT GGTTGTTTGT TTGGTCCATT TACATTTCAT TCGATCATGT TATATTGAGT AGGTAATAGC TATGCTTTGG TTTATCGCAT CCGATGTAAT 
CTTGATGAGC ATTGA 

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