Entry information : PtroGPx01-B (GPX1 / GSHPx-1 / PtroGPx01-B)
Entry ID 7772
Creation 2010-11-23 (Myriam Duval)
Last sequence changes 2010-11-23 (Myriam Duval)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-05-11 (Christophe Dunand)
Peroxidase information: PtroGPx01-B (GPX1 / GSHPx-1 / PtroGPx01-B)
Name (synonym) PtroGPx01-B (GPX1 / GSHPx-1 / PtroGPx01-B)
Class Animal glutathione peroxidase     [Orthogroup: Gpx1003]*
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroGPx01-B
start..stop
S start..stop
PtroGPx01-A 367 9e-132 12..201 12..201
HsGPx01-A 367 9e-132 12..201 14..203
PpyGPx01 365 2e-131 12..201 12..201
HlGPx01 365 5e-131 12..201 12..201
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13324768..13325370 603  
complement(join(13324768..13325370))


exon

Literature and cross-references PtroGPx01-B (GPX1 / GSHPx-1 / PtroGPx01-B)
DNA ref. GenBank:   NC_006491.2 (13325370..13324768)
Protein sequence: PtroGPx01-B (GPX1 / GSHPx-1 / PtroGPx01-B)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   201
PWM (Da):   %s   21810.19  
PI (pH):   %s   6.27
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MYAARPAAAA AQSVYAFSAR LLAVGEPVSL GSLRVKVLLI ENVASLUGTT VRDYTQMNEL QRHLGPRGLV VLGFPCNQFG HQENAKNEEI LNSLKYVRPG GGFQPNFMLF EKGEVNGAGA 
HTLFAFLREA LPAPSDDATA LMTDPKLITW SLVCRNDVAW NFEKFLVGPD GVPLRRYSRR FETIDIEPDI EALLSQGPSC A 

Retrieve as FASTA  
Remarks Complete sequence from genomic. To be reviewed.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTATGCTG CTCGGCCAGC GGCGGCGGCG GCCCAGTCGG TGTATGCCTT CTCGGCGCGC CTGCTGGCCG TCGGGGAGCC TGTGAGCCTG GGCTCCCTGC GGGTCAAGGT ACTACTTATA  GAGAATGTGG CGTCCCTCTG AGGCACCACG GTCCGGGACT ACACCCAGAT GAACGAGCTG CAGCGGCACC TCGGACCCCG GGGCCTGGTG GTGCTTGGCT TCCCGTGCAA CCAGTTTGGG  CATCAGGAGA ACGCCAAGAA CGAAGAGATT CTGAATTCCC TCAAGTACGT CCGACCTGGT GGTGGGTTCC AGCCCAACTT CATGCTCTTC GAGAAGGGCG AGGTGAACGG TGCGGGGGCG  CACACTCTCT TTGCCTTCCT GCGGGAGGCC CTGCCAGCCC CCAGCGACGA CGCCACTGCG CTTATGACCG ACCCCAAGCT CATCACCTGG TCTCTGGTGT GTCGCAACGA TGTTGCCTGG  AACTTTGAGA AGTTCCTGGT GGGCCCTGAC GGTGTGCCCC TACGTAGGTA CAGCCGCCGC TTCGAGACCA TTGACATCGA GCCTGACATC GAAGCCCTGC TGTCTCAAGG GCCCAGCTGT 
GCC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTATGCTG CTCGGCCAGC GGCGGCGGCG GCCCAGTCGG TGTATGCCTT CTCGGCGCGC CTGCTGGCCG TCGGGGAGCC TGTGAGCCTG GGCTCCCTGC GGGTCAAGGT ACTACTTATA  GAGAATGTGG CGTCCCTCTG AGGCACCACG GTCCGGGACT ACACCCAGAT GAACGAGCTG CAGCGGCACC TCGGACCCCG GGGCCTGGTG GTGCTTGGCT TCCCGTGCAA CCAGTTTGGG  CATCAGGAGA ACGCCAAGAA CGAAGAGATT CTGAATTCCC TCAAGTACGT CCGACCTGGT GGTGGGTTCC AGCCCAACTT CATGCTCTTC GAGAAGGGCG AGGTGAACGG TGCGGGGGCG  CACACTCTCT TTGCCTTCCT GCGGGAGGCC CTGCCAGCCC CCAGCGACGA CGCCACTGCG CTTATGACCG ACCCCAAGCT CATCACCTGG TCTCTGGTGT GTCGCAACGA TGTTGCCTGG  AACTTTGAGA AGTTCCTGGT GGGCCCTGAC GGTGTGCCCC TACGTAGGTA CAGCCGCCGC TTCGAGACCA TTGACATCGA GCCTGACATC GAAGCCCTGC TGTCTCAAGG GCCCAGCTGT 
GCC 

Retrieve as FASTA