Entry information : CglobAPx01
Entry ID 7776
Creation 2010-11-25 (Qiang Li)
Last sequence changes 2010-12-10 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-12 (Qiang Li)
Peroxidase information: CglobAPx01
Name CglobAPx01
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Chaetosphaeridiaceae Chaetosphaeridium
Organism Chaetosphaeridium globosum    [TaxId: 96477 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CglobAPx01
start..stop
S start..stop
AfiliAPx02 359 4e-127 1..248 2..249
PgAPx01 351 5e-124 1..248 2..249
PtAPx02 349 3e-123 2..248 3..249
PbAPx01 349 3e-123 2..248 3..249
Literature and cross-references CglobAPx01
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO348569.1   HO348732.1   HO362236.1   HO371596.1   HO379079.1   HO382637.1   HO383510.1   HO383940.1
Protein sequence: CglobAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   248
PWM (Da):   %s   26736.65  
PI (pH):   %s   5.15
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKAYPTVSDD YKTAVAKAKR MLFALILEKQ CAPLMVRLAW HDAGTYDVTT KTGGPNGCMR FTEVQGHGAN AGLSIAVKLV EPIKEKVPEI SYADLYQLAG YVAIQVTGGP ELEFAPGRPD  AESPVVDGRL PDANLGADHL RAIFGHMGLS DKEIVALSGA HALGKAHKDR SGFEGAWTKK PLVFDNDYFI GLLSGVEEGL LVLPTDKALV DDPVFRPFVE LYAKDEEAFF SDYAVAHKSL 
SELGWAEA 

Retrieve as FASTA  
Remarks Complete sequence from ESTs (HO348569.1, HO348732.1...).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCGGCCAGAC GCTGAGAGCC CTGTCGTGGA CCGGCCGACT CGCCAGATGC TAATCTAGGG GCAGTTATTC ATCTCCGTGC GATCTTTGGG CATATGGGAT TGAGTGACAA AGGAAATCGT  TGCTCTTTCA GGAGCTCACG CATTGGGGAA AGGCACACAA GGGACGAGGT CTGGTTTTGA GGGCGCATGG ACAAAGAAGC CCCTTGTATT TGACAACGAC TACTTCATTG GCCTGCTGTC 
GGGTGTGGAA GAGGGCCTCT TGGTTCTTCC TACGGGGGTA CAAGGCGCTT 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGCAT ATCCGACTGT AAGCGATGAC TACAAGACGG CAGTGGCCAA GGCCAAGAGA ATGCTTTTTG CACTGATTCT TGAGAAGCAA TGTGCGCCTT TGATGGTGCG GCTGGCGTGG  CACGATGCTG GCACTTATGA TGTGACCACA AAGACCGGGG GACCAAATGG TTGCATGAGA TTCACTGAAG TGCAGGGGCA TGGAGCTAAT GCTGGTCTCA GTATTGCTGT GAAGCTTGTG  GAGCCAATCA AGGAGAAGGT TCCGGAAATC TCTTATGCAG ACCTTTATCA GCTGGCAGGT TACGTGGCGA TCCAAGTTAC TGGCGGACCT GAGTTGGAGT TTGCCCCTGG GCGGCCAGAC  GCTGAGAGCC CTGTCGTGGA CGGCCGACTG CCAGATGCTA ATCTAGGGGC AGATCATCTC CGTGCGATCT TTGGGCATAT GGGATTGAGT GACAAGGAAA TCGTTGCTCT TTCAGGAGCT  CACGCATTGG GAAAGGCACA CAAGGACAGG TCTGGTTTTG AGGGCGCATG GACAAAGAAG CCCCTTGTAT TTGACAACGA CTACTTCATT GGCCTGCTGT CGGGTGTGGA AGAGGGCCTC  TTGGTTCTTC CTACTGACAA GGCGCTTGTT GACGACCCCG TGTTCCGGCC TTTTGTGGAG CTGTATGCCA AGGATGAGGA GGCCTTCTTC AGTGATTATG CCGTTGCGCA CAAGAGCTTG 
TCCGAGCTAG GTTGGGCAGA GGCCTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTGTACTTGT GTGTAGCTGG CTTTGCGATC TTCTCATTCC GCACTTTCTT TGGATCAATT CCTCATACTT TAAGGAAAGC AAACATGAAG GCATATCCGA CTGTAAGCGA TGACTACAAG  ACGGCAGTGG CCAAGGCCAA GAGAATGCTT TTTGCACTGA TTCTTGAGAA GCAATGTGCG CCTTTGATGG TGCGGCTGGC GTGGCACGAT GCTGGCACTT ATGATGTGAC CACAAAGACC  GGGGGACCAA ATGGTTGCAT GAGATTCACT GAAGTGCAGG GGCATGGAGC TAATGCTGGT CTCAGTATTG CTGTGAAGCT TGTGGAGCCA ATCAAGGAGA AGGTTCCGGA AATCTCTTAT  GCAGACCTTT ATCAGCTGGC AGGTTACGTG GCGATCCAAG TTACTGGCGG ACCTGAGTTG GAGTTTGCCC CTGGGCGGCC AGACGCTGAG AGCCCTGTCG TGGACGGCCG ACTGCCAGAT  GCTAATCTAG GGGCAGATCA TCTCCGTGCG ATCTTTGGGC ATATGGGATT GAGTGACAAG GAAATCGTTG CTCTTTCAGG AGCTCACGCA TTGGGAAAGG CACACAAGGA CAGGTCTGGT  TTTGAGGGCG CATGGACAAA GAAGCCCCTT GTATTTGACA ACGACTACTT CATTGGCCTG CTGTCGGGTG TGGAAGAGGG CCTCTTGGTT CTTCCTACTG ACAAGGCGCT TGTTGACGAC  CCCGTGTTCC GGCCTTTTGT GGAGCTGTAT GCCAAGGATG AGGAGGCCTT CTTCAGTGAT TATGCCGTTG CGCACAAGAG CTTGTCCGAG CTAGGTTGGG CAGAGGCCTA AGCACTCCAC  AACCTGTGGG CATGACTTCT CTATGAACAT GTCAGGTGTC TTATCTTTAT TAAGAACTTT GTTGCATGTG TGTCTTTTCA ATGTGACAAG GAACTGTTTT TACTCACGGC ATTGCCTGGG 
GTTTGCTGTT ACGTGGGACA TTAATTTTTG TCTTCAAGTG AACCTGATTT TGGTGCTTGG TGGCACCTTA C 

Retrieve as FASTA