Entry information : BdiPrx10 (Bradi1g19980)
Entry ID 7829
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx10 (Bradi1g19980)
Name (synonym) BdiPrx10 (Bradi1g19980)
Class Class III peroxidase     [Orthogroup: Prx204]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx10
start..stop
S start..stop
SiPrx19 458 1e-163 1..336 1..322
SbPrx64 437 1e-155 6..336 8..323
SiPrx114 390 9e-137 3..336 4..321
SbPrx16 387 8e-136 24..336 23..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 15989098..15990108 1011  
complement(join(15989098..15990108))


exon

Literature and cross-references BdiPrx10 (Bradi1g19980)
DNA ref. Phytozome 12:   Bd1 (15990108..15989098)
Protein sequence: BdiPrx10 (Bradi1g19980)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336
PWM (Da):   %s   35623.23  
PI (pH):   %s   8.99
Sequence
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Send to Peroxiscan
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MAANKLAILI SLALLSSLAA FHCHALQVGY YRDTCPNAET LVRAHIKKAL RSDPGNGAGL IRMLFHDCFV NGCDASVLLD PTQTNPRPEK LGAPNNPSLR GYEAIDAAKS ALELACPGVV  SCADVVAFAA RDASYLLSHG RVSFLVPAGR LDGRVSREND TQFLPGPSSN LTTLVGSFAA MGMSVEDLVV LSGAHSIGRS HCSSFVQDRL NASSSSSPAP AADMSAPLAS FLRRRCPASV 
PVAGVKDPTV AQDVVTRDVL DNQFYRNVLA RRVLFASDAA LLEEVDAGRM VRANARFPAS WERKFARAMV KMAAIGVKGP QGDGRGEVRR NCRLVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, no intron), no EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCCA ATAAGCTCGC CATCCTCATC TCCTTGGCCC TGCTCTCATC CTTGGCCGCT TTCCATTGCC ATGCCCTCCA GGTGGGCTAC TACCGGGACA CATGCCCGAA CGCCGAGACC  CTAGTCCGCG CCCACATCAA GAAAGCCCTC CGCTCCGACC CCGGCAACGG CGCGGGGCTC ATCCGGATGC TCTTCCACGA CTGCTTCGTC AACGGCTGCG ACGCCTCGGT CCTCCTCGAC  CCGACCCAAA CAAACCCGCG GCCGGAGAAG CTCGGCGCGC CCAACAACCC GAGCCTCCGG GGCTACGAGG CCATCGACGC GGCCAAATCC GCCCTCGAGC TCGCCTGCCC CGGCGTCGTC  TCCTGCGCCG ACGTCGTCGC ATTCGCCGCC CGCGACGCCT CCTACCTCCT CAGCCACGGC CGGGTCTCCT TCCTCGTCCC CGCCGGCCGC CTCGACGGCC GCGTCTCCCG GGAGAACGAC  ACGCAGTTCT TGCCGGGCCC TTCGTCCAAC CTGACGACGC TCGTGGGGAG CTTCGCGGCC ATGGGGATGT CGGTGGAGGA CCTCGTGGTG CTGTCCGGGG CGCACTCCAT CGGGCGGTCC  CACTGCTCGT CCTTCGTCCA GGACCGCCTC AACGCTTCTT CTTCTTCTTC TCCGGCGCCG GCGGCAGACA TGAGCGCGCC GCTCGCGAGC TTCCTCAGGC GGCGGTGCCC GGCGTCCGTC  CCGGTGGCCG GGGTGAAGGA CCCGACGGTG GCGCAGGACG TGGTGACGAG GGACGTGCTG GACAACCAGT TCTACCGGAA CGTGCTGGCG AGGCGCGTGC TGTTCGCGTC GGACGCGGCG  CTGCTGGAGG AAGTGGACGC GGGGAGGATG GTGCGCGCCA ACGCCAGGTT CCCGGCGTCG TGGGAGAGGA AGTTCGCCAG GGCCATGGTC AAGATGGCCG CCATTGGCGT CAAGGGCCCC 
CAAGGGGATG GCCGAGGCGA GGTCAGGAGG AACTGCCGCC TCGTCAACTA G 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCCA ATAAGCTCGC CATCCTCATC TCCTTGGCCC TGCTCTCATC CTTGGCCGCT TTCCATTGCC ATGCCCTCCA GGTGGGCTAC TACCGGGACA CATGCCCGAA CGCCGAGACC  CTAGTCCGCG CCCACATCAA GAAAGCCCTC CGCTCCGACC CCGGCAACGG CGCGGGGCTC ATCCGGATGC TCTTCCACGA CTGCTTCGTC AACGGCTGCG ACGCCTCGGT CCTCCTCGAC  CCGACCCAAA CAAACCCGCG GCCGGAGAAG CTCGGCGCGC CCAACAACCC GAGCCTCCGG GGCTACGAGG CCATCGACGC GGCCAAATCC GCCCTCGAGC TCGCCTGCCC CGGCGTCGTC  TCCTGCGCCG ACGTCGTCGC ATTCGCCGCC CGCGACGCCT CCTACCTCCT CAGCCACGGC CGGGTCTCCT TCCTCGTCCC CGCCGGCCGC CTCGACGGCC GCGTCTCCCG GGAGAACGAC  ACGCAGTTCT TGCCGGGCCC TTCGTCCAAC CTGACGACGC TCGTGGGGAG CTTCGCGGCC ATGGGGATGT CGGTGGAGGA CCTCGTGGTG CTGTCCGGGG CGCACTCCAT CGGGCGGTCC  CACTGCTCGT CCTTCGTCCA GGACCGCCTC AACGCTTCTT CTTCTTCTTC TCCGGCGCCG GCGGCAGACA TGAGCGCGCC GCTCGCGAGC TTCCTCAGGC GGCGGTGCCC GGCGTCCGTC  CCGGTGGCCG GGGTGAAGGA CCCGACGGTG GCGCAGGACG TGGTGACGAG GGACGTGCTG GACAACCAGT TCTACCGGAA CGTGCTGGCG AGGCGCGTGC TGTTCGCGTC GGACGCGGCG  CTGCTGGAGG AAGTGGACGC GGGGAGGATG GTGCGCGCCA ACGCCAGGTT CCCGGCGTCG TGGGAGAGGA AGTTCGCCAG GGCCATGGTC AAGATGGCCG CCATTGGCGT CAAGGGCCCC 
CAAGGGGATG GCCGAGGCGA GGTCAGGAGG AACTGCCGCC TCGTCAACTA G 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCCA ATAAGCTCGC CATCCTCATC TCCTTGGCCC TGCTCTCATC CTTGGCCGCT TTCCATTGCC ATGCCCTCCA GGTGGGCTAC TACCGGGACA CATGCCCGAA CGCCGAGACC  CTAGTCCGCG CCCACATCAA GAAAGCCCTC CGCTCCGACC CCGGCAACGG CGCGGGGCTC ATCCGGATGC TCTTCCACGA CTGCTTCGTC AACGGCTGCG ACGCCTCGGT CCTCCTCGAC  CCGACCCAAA CAAACCCGCG GCCGGAGAAG CTCGGCGCGC CCAACAACCC GAGCCTCCGG GGCTACGAGG CCATCGACGC GGCCAAATCC GCCCTCGAGC TCGCCTGCCC CGGCGTCGTC  TCCTGCGCCG ACGTCGTCGC ATTCGCCGCC CGCGACGCCT CCTACCTCCT CAGCCACGGC CGGGTCTCCT TCCTCGTCCC CGCCGGCCGC CTCGACGGCC GCGTCTCCCG GGAGAACGAC  ACGCAGTTCT TGCCGGGCCC TTCGTCCAAC CTGACGACGC TCGTGGGGAG CTTCGCGGCC ATGGGGATGT CGGTGGAGGA CCTCGTGGTG CTGTCCGGGG CGCACTCCAT CGGGCGGTCC  CACTGCTCGT CCTTCGTCCA GGACCGCCTC AACGCTTCTT CTTCTTCTTC TCCGGCGCCG GCGGCAGACA TGAGCGCGCC GCTCGCGAGC TTCCTCAGGC GGCGGTGCCC GGCGTCCGTC  CCGGTGGCCG GGGTGAAGGA CCCGACGGTG GCGCAGGACG TGGTGACGAG GGACGTGCTG GACAACCAGT TCTACCGGAA CGTGCTGGCG AGGCGCGTGC TGTTCGCGTC GGACGCGGCG  CTGCTGGAGG AAGTGGACGC GGGGAGGATG GTGCGCGCCA ACGCCAGGTT CCCGGCGTCG TGGGAGAGGA AGTTCGCCAG GGCCATGGTC AAGATGGCCG CCATTGGCGT CAAGGGCCCC  CAAGGGGATG GCCGAGGCGA GGTCAGGAGG AACTGCCGCC TCGTCAACTA GCTACTGCGG ATGTGCGATC AATTTGATTG ATTTCGTTTT TGATCGATCC CACCACTTCG GGCCGATTGA  TCTTTTTTTC GTTTCTTTCT CCCGTGCGTG CATTCCCTTG CTCCTGTGTT GCTTTCTTTC TTGCAGGGAA TTGATGATCG ATGCTTTGTT TGTTGATTGA GTTTTTTTTT TAATGTTGCT  CTTTGTGATC TGGCTAGCTT TCCTCAAGGA ATTGCTCTTT GCTAGTAGGA TCTGATTTGC ATGTCAGATA ATTTTGGCAT TACAATATAG AGTCATGTAC TGAGCAGCAT GCCTCGCGTG 
TAAATTTGAT TGTTGCTGAA TTGGAAAATA GCTAATTCGT A 

Retrieve as FASTA