Entry information : BdiPrx49 (Bradi1g77140)
Entry ID 7843
Creation 2011-01-12 (Toky Ramarohetra)
Last sequence changes 2011-01-12 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx49 (Bradi1g77140)
Name (synonym) BdiPrx49 (Bradi1g77140)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx49
start..stop
S start..stop
TaPrx55 523 0 35..331 33..329
TaPrx55-A 520 0 35..331 33..329
HvPrx27 517 0 35..331 11..307
OsPrx33 502 0 27..333 3..311
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 73503876..73504118 243 N° 2 73504747..73504935 189 N° 3 73506727..73507296 570  
join(73503876..73504118,73504747..73504935,73506727..73507296)


exon

Literature and cross-references BdiPrx49 (Bradi1g77140)
DNA ref. Phytozome 12:   Bd1 (73503876..73507296)
Protein sequence: BdiPrx49 (Bradi1g77140)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (299)
PWM (Da):   %s   34590.3 (30864.2)  
PI (pH):   %s   7.68 (5.71) Peptide Signal:   %s   cut: 35 range:35-333
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEAQARGGLRIPIPIRMRLLVVMLVLMAARPAMAQLAVGYYDTLCPAAEIIVQEEVSKGVSGSPGTAAGLLRLHFHDCFVRGCDASVLLDSTPGNKAEKDAPPNSSLRGFDVIDKAKTRLEQACYRVVSCADILAFAARDALALVGGSAYQVPAGRRDGNVSSAGETNGNLPPPTANVNQLTQIFGSKGLSKAQMVTLSGAHTVGAAQCSSFSSRLYSSGPNGGQDPTMDPKYLTALTAQCPQKGAQQAVPMDPVTPNAFDTNYYANLVANRGLLSSDQALLADPNASAQVVAYTSSPDTFQTDFANAMIAMGNVGVLTGNAGNIRTNCRVAS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1, 2 and 3), no EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAGCGCAGGCCAGAGGAGGATTGAGAATTCCAATTCCAATTCGAATGCGGCTGTTGGTTGTGATGCTGGTGCTGATGGCGGCGAGGCCGGCGATGGCGCAGCTGGCCGTGGGGTAC
TACGACACGCTGTGCCCGGCGGCGGAGATCATCGTGCAGGAGGAGGTCAGCAAGGGCGTCTCCGGCAGCCCCGGCACGGCCGCGGGGCTCCTCCGGCTCCACTTCCACGACTGCTTCGTC
AGG
GTCAGTACTAAGAACACTGCTATATATGCTGCAGCCAGCAAATTCAGGTCCTCCAATTCATCATCCGTTGATTAATGAGGCCACCAGCTTCCAGTTCGGCGTAAGAGTGTGCAGGTA
GATGGATAGACAATTAGACAGATAGATTGATACTTGGTCTGTTCTCTGCCTTCTGCTTCGTCTGTTTCTTGGTCTGTTCTCGCGTATCTGCTGCCTTTTACATCAGATACGAAAGGAATC
GGGCAGTAGTAGATGTGGGGAGGTAGATGGCGCTCTGCACGCATGGACGGACCTGGCCGGGCGCTTGGAGCCTTGGAGCCAGGAATGGCGACAGTCTGACAGGCCGTTGTCATGTGCATG
TTCAGTTCCAAAAGTTACCTCAACAATCACATTTTCCTCTCTCTGTTTCCTTTCTTTTCCCAAACAAAAAAAAGAAAAGAAGAAGGATACAGCTTCCACCGTACAGTCCAGCCATCCAAA
CGTGACGGTGTAGTAGTAGAGCCTAGGACAGTGATGATGCGTGCGCGTTGTTTCATTGCTAATTTCATCTGACATCATCACGAATTCATTCATCATCATCACCTTCTTTGCTCTGCTGAG
TCGTTTACTGAAACTGCAATTGCGATTGCAGGGGTGCGACGCGTCGGTGCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACGCGCCGCCAAACTCGAGCCTCCGGGGGTTCGA
CGTGATCGACAAGGCCAAGACGCGGCTCGAGCAGGCCTGCTACCGGGTCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGAGACGCCCTCGCCCTG
GTAAACACACCTCACCTTCC
CCTGCCATTTCACATGTCACTGTTACTTCCCTCCATTCTTACCATCTGCAAGCTCCGAGTCGAGCGAACTTGCTCTCGGATCACGCGCAGAGGGACGTGATCTTCTGGAATACAGTATAT
TAACACACATGGGGGGCGCCTCTACCGATCTCCCTAATTATGCCTTTACCGAATGGCACCAAGCTTTTCCCTCGACCTTTCTCAGAAAAGCAAGGCTGCCTTTTACAACTCCTCCTCTCA
TCTCCTCCAACAGCAGGAACAACATCCTTTGCTTTCCAAAGGGCACATTTGTACCGTAATAAGTATGCTGCCGCCTGCCTCCATCGAACGACGATATGCCTGGACAAAGAAAAGAAATGA
ATGTCTCGTTCGGGCAGCCGAATCCGGCATTGCTTTGCTCAGTCTGCGTTCCGGTGGGCACCGCACGGGGCATGCCTGTCTAAGCAACGTTTTGGCACCGCATCTGGCTGGCCCGTTGCG
TTGGGCACACGGGAGTCCGTTACGGCAGGCCAAGCGGTCGGTGTCCGTATGTGCATCAACAGCTAGCTATCAGACCGGCGTCTCCTATCCTATCCTGCGTACTCTGGCTCACATGGCCGT
GTCGCGCTCACACCGCTTCGAGAAGATCAAGAAACAAAGGAAACCTCGTTAATTTGCTTTCTCCCGAGCCTTCTTTTTCAGATGTGGCGATACAAAGGACAGGATCCGATCTGTCCGATC
GTGGCACGGTGCAGGGGGTTCAGTCAGTTAGAAAGTTTACCTAGCTTGGGCCTTTTGTTCTTTTCGTTTTTACCAGCAGTAGAATCGAGCTCTGGCACGTGTAGTGTTGGGCTAAAGGCC
AAATCATTCCCCGATCGAGCTTTGCACCGATCACTATGCAACAAGAAAAATCGTGAACCAGATGGCATCCACATGTTACTGAGCGCATGCAGGGGGACGAAGCTCGCACACCGAAGCAAA
TGATGAACTTGAGTGCTTCTAGAGTTTGTTGCTCTTTCCCGATGGAGGCAAGAATAGTTAAATTTCTCTGTCAGTCTTGCTCACGACAACGGTAGTTAACAGAAAATTAATGTGTTAGCT
AGTCATAGGGTGGAGTACACTGCTAGTCATACTACCGTTGCAGCTTTATGTGAGTGATACTGAAAGAAGTCAACGTGTTAGTATCAAGATTGATTATGGTTGATCACCGAGCACTTGGCA
GCAGCTCTTGCGACTGATCAAAGTGCATGAGCTTGAGCAGAACACTCCATGTCATGATGACCGAATACTGCCAGTGCGAGAGTGATAGTGAAGCCTGACTCACTCAGAGCTGGAAACAGC
ACATACAGGCGTTTCCCTTAAATAAACAGCACATCTGCACATAAAGGCCTCCCCTTCATGGGAAAAAGACACAGGCCACCACCAGAAACTACACTCGTGAGGACGACCGGCCGTTCGTTC
GGCCCCCAAATCAATTACCAGTAATCAAAAGAAGGGGGTTAATGGCGAGAGAGCTATCAGCAGGATTCCGGTCATCGAGTGGCGCACGTCAAGATACGTTCAGGGCCGGTCGACTTCTAT
AGTTTAGTTCAGTTACGACGTGGATCCGTCCCACGCCCATGTGGCCTGCACATGCCCCATGACCCACGAATTCCGTCTCCATTCCCCAGTTGGATGGCATGGAGCCCATTGCCCGCGCTC
ACCACAAAAACGAACGGAAACAAAGCAATTCCTCTCTATATTCACTTTCTAATTCACTGAAACTTATGAGCTGTGTTTGTGTGTGTTGCAGGTGGGAGGCAGCGCGTACCAGGTGCCGGC
GGGGCGACGAGACGGGAACGTCTCGTCGGCCGGCGAAACCAACGGGAACCTGCCACCGCCCACGGCCAACGTGAACCAGCTGACCCAGATCTTCGGCTCCAAGGGCCTCTCCAAGGCCCA
GATGGTGACGCTGTCGGGGGCGCACACGGTGGGCGCGGCCCAGTGCAGCTCCTTCAGCAGCAGGCTCTACTCGTCGGGCCCCAACGGGGGCCAGGACCCGACCATGGACCCCAAGTACCT
GACGGCCCTCACGGCCCAGTGCCCGCAGAAAGGGGCCCAGCAGGCCGTGCCCATGGACCCCGTCACGCCCAACGCCTTCGACACGAATTATTACGCCAATCTGGTGGCTAACCGGGGCCT
GCTGTCTTCCGACCAGGCGCTGCTCGCCGACCCGAACGCGTCCGCTCAGGTGGTCGCCTACACCAGCAGCCCTGACACGTTCCAGACCGACTTTGCTAATGCCATGATCGCCATGGGGAA
TGTTGGCGTGCTCACTGGGAACGCCGGGAACATCAGGACCAACTGCAGAGTAGCCTCCTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAGCGCAGGCCAGAGGAGGATTGAGAATTCCAATTCCAATTCGAATGCGGCTGTTGGTTGTGATGCTGGTGCTGATGGCGGCGAGGCCGGCGATGGCGCAGCTGGCCGTGGGGTAC
TACGACACGCTGTGCCCGGCGGCGGAGATCATCGTGCAGGAGGAGGTCAGCAAGGGCGTCTCCGGCAGCCCCGGCACGGCCGCGGGGCTCCTCCGGCTCCACTTCCACGACTGCTTCGTC
AGG
GGGTGCGACGCGTCGGTGCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACGCGCCGCCAAACTCGAGCCTCCGGGGGTTCGACGTGATCGACAAGGCCAAGACGCGGCTC
GAGCAGGCCTGCTACCGGGTCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGAGACGCCCTCGCCCTG
GTGGGAGGCAGCGCGTACCAGGTGCCGGCGGGGCGACGAGACGGGAAC
GTCTCGTCGGCCGGCGAAACCAACGGGAACCTGCCACCGCCCACGGCCAACGTGAACCAGCTGACCCAGATCTTCGGCTCCAAGGGCCTCTCCAAGGCCCAGATGGTGACGCTGTCGGGG
GCGCACACGGTGGGCGCGGCCCAGTGCAGCTCCTTCAGCAGCAGGCTCTACTCGTCGGGCCCCAACGGGGGCCAGGACCCGACCATGGACCCCAAGTACCTGACGGCCCTCACGGCCCAG
TGCCCGCAGAAAGGGGCCCAGCAGGCCGTGCCCATGGACCCCGTCACGCCCAACGCCTTCGACACGAATTATTACGCCAATCTGGTGGCTAACCGGGGCCTGCTGTCTTCCGACCAGGCG
CTGCTCGCCGACCCGAACGCGTCCGCTCAGGTGGTCGCCTACACCAGCAGCCCTGACACGTTCCAGACCGACTTTGCTAATGCCATGATCGCCATGGGGAATGTTGGCGTGCTCACTGGG
AACGCCGGGAACATCAGGACCAACTGCAGAGTAGCCTCCTGA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CCTATAAACC ACACCCTGAT ATTCTCCTCC CCACCCTTCT TCTTAACCAA GAAGCACTTC CTCACTGAAA CAAGCCTCAA ACCGTCTAGC TCTCGCAAGA TTAGCCCTTA AGCAAGAGCT  GAGAATTGGC AATCCAGAGC TAGTTTTTCT GGACCAAAAA TCCAGAGCTA GTTAAGCAGG GAGAGAGAGA TGGAAGCGCA GGCCAGAGGA GGATTGAGAA TTCCAATTCC AATTCGAATG  CGGCTGTTGG TTGTGATGCT GGTGCTGATG GCGGCGAGGC CGGCGATGGC GCAGCTGGCC GTGGGGTACT ACGACACGCT GTGCCCGGCG GCGGAGATCA TCGTGCAGGA GGAGGTCAGC  AAGGGCGTCT CCGGCAGCCC CGGCACGGCC GCGGGGCTCC TCCGGCTCCA CTTCCACGAC TGCTTCGTCA GGGGGTGCGA CGCGTCGGTG CTGCTGGACT CGACGCCGGG GAACAAGGCG  GAGAAGGACG CGCCGCCAAA CTCGAGCCTC CGGGGGTTCG ACGTGATCGA CAAGGCCAAG ACGCGGCTCG AGCAGGCCTG CTACCGGGTC GTCTCCTGCG CCGACATCCT CGCCTTCGCC  GCCCGAGACG CCCTCGCCCT GGTGGGAGGC AGCGCGTACC AGGTGCCGGC GGGGCGACGA GACGGGAACG TCTCGTCGGC CGGCGAAACC AACGGGAACC TGCCACCGCC CACGGCCAAC  GTGAACCAGC TGACCCAGAT CTTCGGCTCC AAGGGCCTCT CCAAGGCCCA GATGGTGACG CTGTCGGGGG CGCACACGGT GGGCGCGGCC CAGTGCAGCT CCTTCAGCAG CAGGCTCTAC  TCGTCGGGCC CCAACGGGGG CCAGGACCCG ACCATGGACC CCAAGTACCT GACGGCCCTC ACGGCCCAGT GCCCGCAGAA AGGGGCCCAG CAGGCCGTGC CCATGGACCC CGTCACGCCC  AACGCCTTCG ACACGAATTA TTACGCCAAT CTGGTGGCTA ACCGGGGCCT GCTGTCTTCC GACCAGGCGC TGCTCGCCGA CCCGAACGCG TCCGCTCAGG TGGTCGCCTA CACCAGCAGC  CCTGACACGT TCCAGACCGA CTTTGCTAAT GCCATGATCG CCATGGGGAA TGTTGGCGTG CTCACTGGGA ACGCCGGGAA CATCAGGACC AACTGCAGAG TAGCCTCCTG ATTCAGCTGA  GATTAGAGTT GATCGATTGA AGGCTTGGTT CAAATGTATG TAGTCCGTTC TGTCGTGCTA GCTAGCTAGC TTAATTAGCT CCTCCCATCT TTTTTCTTCT CCTTTTCCTC TCTTACATAT  ATAGTACTGG TACTTTCCTT TTGTGCTTGG ATTCTTTTAG CCTCTGTATG TAGTATCTAG CTAGCTAGCT AGTTACCGGA TTCATAACTG TATATGTGAT GATTGGATAC CCAACAGTGC 
TTAATAAGAA GCTATATATA CGGATCGGAA CAGGCAGTTG CTGCCACTGT 

Retrieve as FASTA