Entry information : BdiPrx113 (Bradi3g59660)
Entry ID 7879
Creation 2011-01-14 (Toky Ramarohetra)
Last sequence changes 2011-01-14 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx113 (Bradi3g59660)
Name (synonym) BdiPrx113 (Bradi3g59660)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx113
start..stop
S start..stop
ZmPrx71 558 0 1..339 9..347
ZmPrx57 557 0 3..339 2..339
SbPrx80 551 0 31..339 39..347
SiPrx81 540 0 21..342 27..341
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 58783453..58784502 1050  
join(58783453..58784502)


exon

Literature and cross-references BdiPrx113 (Bradi3g59660)
DNA ref. Phytozome 12:   Bd3 (58783453..58784502)
Protein sequence: BdiPrx113 (Bradi3g59660)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   349 (329)
PWM (Da):   %s   37501.88 (35490.7)  
PI (pH):   %s   6.62 (6.16) Peptide Signal:   %s   cut: 21 range:21-349
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRRLSLFLLL AAAALTGAAA GGPPATTPIK LSPTFYSQTC PRAERIVAEV VQSKQMQNPT TAAGVLRVFF HDCFVTGCDA SVLIAPTHFA KSEKDADINH SLPGDAFDAV VRSKLALELE  CPGVVSCADI LALASGVLVT MTGGPRFPVP LGRKDSLSSS PTAPDIELPH SNFTISRIIE LFLAKNFTVQ EMVALSGAHT LGFSHCQEFA SRIYNYHDKA GKPLPFDPSM NPGYAKGLQD 
ACKDYLKDPT IAAFNDIMTP GKFDNQYYVN LERGLGLLST DQDLWSDART KPFVQRYAGN NTVFFEDFAK AMEKLSLFGV KTGADGEIRR RCDAYNSGPT GKADAAEAA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no introns). No ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGCCGTC TGTCCCTCTT CCTCCTCCTG GCCGCGGCGG CCCTGACCGG CGCCGCGGCG GGCGGCCCAC CGGCGACAAC ACCCATCAAG CTATCGCCAA CCTTCTACAG CCAGACGTGC  CCGCGCGCGG AGCGGATCGT GGCAGAGGTC GTCCAATCAA AGCAGATGCA GAACCCGACG ACGGCCGCGG GCGTCCTCCG GGTCTTCTTC CACGACTGCT TCGTCACCGG CTGCGACGCC  TCCGTCCTCA TCGCGCCCAC CCACTTCGCG AAATCCGAAA AGGACGCCGA CATCAACCAC TCTCTCCCCG GCGACGCCTT CGACGCGGTG GTCCGCTCAA AGCTCGCGCT AGAACTCGAG  TGCCCGGGCG TCGTCTCCTG CGCCGACATC CTCGCCCTGG CATCCGGGGT CCTCGTCACA ATGACAGGCG GGCCCAGGTT CCCGGTCCCT CTAGGCCGCA AGGACTCGCT CTCGTCTTCC  CCGACAGCCC CCGACATCGA GCTCCCGCAC TCAAACTTCA CCATCTCCCG CATCATCGAG CTCTTCTTGG CAAAAAACTT CACGGTCCAG GAAATGGTGG CCTTATCCGG GGCGCACACG  CTGGGATTCT CCCACTGCCA GGAGTTCGCG TCCAGGATCT ACAACTACCA CGACAAGGCC GGCAAGCCGC TGCCGTTCGA CCCGAGCATG AACCCCGGGT ACGCCAAGGG GCTCCAGGAC  GCCTGCAAGG ACTACCTCAA GGACCCGACC ATCGCGGCCT TCAACGACAT CATGACCCCC GGCAAGTTCG ACAACCAGTA TTACGTCAAC CTGGAGCGTG GGTTGGGGCT TCTCAGCACT  GACCAGGATC TGTGGTCGGA CGCCCGCACC AAGCCCTTCG TGCAGCGCTA CGCCGGGAAT AATACGGTGT TTTTCGAGGA CTTCGCCAAG GCCATGGAGA AGCTCAGCCT CTTCGGCGTC 
AAGACGGGCG CCGATGGGGA GATCAGAAGG CGCTGCGACG CTTACAACAG CGGGCCAACG GGCAAGGCCG ACGCCGCCGA AGCCGCCTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGCCGTC TGTCCCTCTT CCTCCTCCTG GCCGCGGCGG CCCTGACCGG CGCCGCGGCG GGCGGCCCAC CGGCGACAAC ACCCATCAAG CTATCGCCAA CCTTCTACAG CCAGACGTGC  CCGCGCGCGG AGCGGATCGT GGCAGAGGTC GTCCAATCAA AGCAGATGCA GAACCCGACG ACGGCCGCGG GCGTCCTCCG GGTCTTCTTC CACGACTGCT TCGTCACCGG CTGCGACGCC  TCCGTCCTCA TCGCGCCCAC CCACTTCGCG AAATCCGAAA AGGACGCCGA CATCAACCAC TCTCTCCCCG GCGACGCCTT CGACGCGGTG GTCCGCTCAA AGCTCGCGCT AGAACTCGAG  TGCCCGGGCG TCGTCTCCTG CGCCGACATC CTCGCCCTGG CATCCGGGGT CCTCGTCACA ATGACAGGCG GGCCCAGGTT CCCGGTCCCT CTAGGCCGCA AGGACTCGCT CTCGTCTTCC  CCGACAGCCC CCGACATCGA GCTCCCGCAC TCAAACTTCA CCATCTCCCG CATCATCGAG CTCTTCTTGG CAAAAAACTT CACGGTCCAG GAAATGGTGG CCTTATCCGG GGCGCACACG  CTGGGATTCT CCCACTGCCA GGAGTTCGCG TCCAGGATCT ACAACTACCA CGACAAGGCC GGCAAGCCGC TGCCGTTCGA CCCGAGCATG AACCCCGGGT ACGCCAAGGG GCTCCAGGAC  GCCTGCAAGG ACTACCTCAA GGACCCGACC ATCGCGGCCT TCAACGACAT CATGACCCCC GGCAAGTTCG ACAACCAGTA TTACGTCAAC CTGGAGCGTG GGTTGGGGCT TCTCAGCACT  GACCAGGATC TGTGGTCGGA CGCCCGCACC AAGCCCTTCG TGCAGCGCTA CGCCGGGAAT AATACGGTGT TTTTCGAGGA CTTCGCCAAG GCCATGGAGA AGCTCAGCCT CTTCGGCGTC 
AAGACGGGCG CCGATGGGGA GATCAGAAGG CGCTGCGACG CTTACAACAG CGGGCCAACG GGCAAGGCCG ACGCCGCCGA AGCCGCCTGA 

Retrieve as FASTA