Entry information : BdiPrx120 (Bradi4g27680)
Entry ID 7886
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx120 (Bradi4g27680)
Name (synonym) BdiPrx120 (Bradi4g27680)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx120
start..stop
S start..stop
TaPrx23 553 0 8..355 4..354
TaPrx23-1D 546 0 31..361 34..361
AtaPrx23-D 536 0 31..355 31..355
HvPrx105 528 0 33..347 34..348
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 32847679..32848764 1086  
join(32847679..32848764)


exon

Literature and cross-references BdiPrx120 (Bradi4g27680)
DNA ref. Phytozome 12:   Bd4 (32847679..32848764)
Protein sequence: BdiPrx120 (Bradi4g27680)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   361 (334)
PWM (Da):   %s   38657.67 (35999.2)  
PI (pH):   %s   5.4 (5.18) Peptide Signal:   %s   cut: 28 range:28-361
Sequence
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Send to Peroxiscan
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MASSSSFSAA RLLLVAAALV LLQLASSDSE AAPPLPSGLS FDFYKSSCPQ AESIVSSFLQ DAIRRDIGLA AALLRVHFHD CFVQGCDGSV LLDKTRAGQS SEKDAPPNVT LRPTAFNAIN  AVRALLERAC GGPVVSCADI AALAARDSVR LAGGPWYAVP LGRRDGLEPA PLQAIFDALP PPTSNVTTLL RFLAKIGLDA DDLVSLSGAH TLGIAHCTSF QERLFPEDDP TMNKWFAGQL  KLTCPRLNTD NTTANDIRTP DAFDNKYYVD LMNRQGLFTS DQDLHTDART KPIVTRFAVD QSAFFQQFVK SMVKMGQIQV LTGAKGQIRR DCAVPNAARA DDDLPWSVVQ TVVEAAESTV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, no intron), no EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTT CCTCCTCCTT CTCAGCAGCT CGCCTCCTGC TCGTCGCGGC AGCGCTGGTG CTGCTGCAAC TGGCGTCCTC CGACTCCGAG GCAGCGCCAC CATTACCCAG CGGCCTATCC  TTCGACTTCT ACAAATCCAG CTGCCCGCAA GCCGAGTCCA TCGTGTCCAG CTTCCTCCAG GACGCCATCC GCCGCGACAT CGGCCTGGCC GCGGCACTCC TCAGGGTCCA CTTCCACGAC  TGCTTCGTGC AGGGGTGCGA CGGGTCCGTG CTCCTGGACA AGACCCGCGC CGGCCAGAGC AGCGAGAAGG ACGCCCCGCC CAACGTCACG CTCCGGCCCA CGGCCTTCAA CGCCATCAAC  GCCGTCCGGG CCCTCCTGGA GCGGGCCTGC GGCGGGCCCG TGGTGTCCTG CGCCGACATC GCGGCGCTCG CGGCCCGCGA CTCCGTGCGC CTGGCCGGCG GGCCGTGGTA CGCCGTCCCC  TTGGGCCGCC GCGACGGGCT CGAGCCGGCG CCGCTCCAGG CCATCTTCGA CGCGCTCCCG CCGCCGACGT CCAACGTCAC CACGCTCCTC CGGTTCCTGG CCAAGATCGG CCTCGACGCC  GACGACCTCG TTTCCCTCTC CGGCGCGCAC ACGCTGGGCA TCGCGCACTG CACGTCGTTC CAGGAGCGGC TGTTCCCCGA GGACGACCCC ACCATGAACA AGTGGTTCGC GGGGCAGCTC  AAGCTCACCT GCCCCAGGCT CAACACCGAC AACACCACGG CGAATGACAT CCGTACGCCC GACGCCTTCG ACAACAAGTA CTACGTCGAC CTGATGAACC GGCAGGGGCT CTTCACCTCC  GACCAGGACC TGCACACGGA CGCCAGGACC AAGCCCATCG TCACCAGGTT CGCGGTCGAC CAGTCGGCGT TTTTCCAGCA GTTTGTAAAG TCCATGGTGA AGATGGGCCA GATCCAGGTG  CTCACCGGCG CCAAGGGCCA GATCCGCAGG GACTGCGCCG TGCCCAACGC TGCCCGCGCC GATGACGACC TCCCCTGGTC CGTCGTCCAG ACCGTCGTCG AGGCTGCTGA GAGCACGGTG 
CTGTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTT CCTCCTCCTT CTCAGCAGCT CGCCTCCTGC TCGTCGCGGC AGCGCTGGTG CTGCTGCAAC TGGCGTCCTC CGACTCCGAG GCAGCGCCAC CATTACCCAG CGGCCTATCC  TTCGACTTCT ACAAATCCAG CTGCCCGCAA GCCGAGTCCA TCGTGTCCAG CTTCCTCCAG GACGCCATCC GCCGCGACAT CGGCCTGGCC GCGGCACTCC TCAGGGTCCA CTTCCACGAC  TGCTTCGTGC AGGGGTGCGA CGGGTCCGTG CTCCTGGACA AGACCCGCGC CGGCCAGAGC AGCGAGAAGG ACGCCCCGCC CAACGTCACG CTCCGGCCCA CGGCCTTCAA CGCCATCAAC  GCCGTCCGGG CCCTCCTGGA GCGGGCCTGC GGCGGGCCCG TGGTGTCCTG CGCCGACATC GCGGCGCTCG CGGCCCGCGA CTCCGTGCGC CTGGCCGGCG GGCCGTGGTA CGCCGTCCCC  TTGGGCCGCC GCGACGGGCT CGAGCCGGCG CCGCTCCAGG CCATCTTCGA CGCGCTCCCG CCGCCGACGT CCAACGTCAC CACGCTCCTC CGGTTCCTGG CCAAGATCGG CCTCGACGCC  GACGACCTCG TTTCCCTCTC CGGCGCGCAC ACGCTGGGCA TCGCGCACTG CACGTCGTTC CAGGAGCGGC TGTTCCCCGA GGACGACCCC ACCATGAACA AGTGGTTCGC GGGGCAGCTC  AAGCTCACCT GCCCCAGGCT CAACACCGAC AACACCACGG CGAATGACAT CCGTACGCCC GACGCCTTCG ACAACAAGTA CTACGTCGAC CTGATGAACC GGCAGGGGCT CTTCACCTCC  GACCAGGACC TGCACACGGA CGCCAGGACC AAGCCCATCG TCACCAGGTT CGCGGTCGAC CAGTCGGCGT TTTTCCAGCA GTTTGTAAAG TCCATGGTGA AGATGGGCCA GATCCAGGTG  CTCACCGGCG CCAAGGGCCA GATCCGCAGG GACTGCGCCG TGCCCAACGC TGCCCGCGCC GATGACGACC TCCCCTGGTC CGTCGTCCAG ACCGTCGTCG AGGCTGCTGA GAGCACGGTG 
CTGTGA 

Retrieve as FASTA  
cDNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTT CCTCCTCCTT CTCAGCAGCT CGCCTCCTGC TCGTCGCGGC AGCGCTGGTG CTGCTGCAAC TGGCGTCCTC CGACTCCGAG GCAGCGCCAC CATTACCCAG CGGCCTATCC  TTCGACTTCT ACAAATCCAG CTGCCCGCAA GCCGAGTCCA TCGTGTCCAG CTTCCTCCAG GACGCCATCC GCCGCGACAT CGGCCTGGCC GCGGCACTCC TCAGGGTCCA CTTCCACGAC  TGCTTCGTGC AGGGGTGCGA CGGGTCCGTG CTCCTGGACA AGACCCGCGC CGGCCAGAGC AGCGAGAAGG ACGCCCCGCC CAACGTCACG CTCCGGCCCA CGGCCTTCAA CGCCATCAAC  GCCGTCCGGG CCCTCCTGGA GCGGGCCTGC GGCGGGCCCG TGGTGTCCTG CGCCGACATC GCGGCGCTCG CGGCCCGCGA CTCCGTGCGC CTGGCCGGCG GGCCGTGGTA CGCCGTCCCC  TTGGGCCGCC GCGACGGGCT CGAGCCGGCG CCGCTCCAGG CCATCTTCGA CGCGCTCCCG CCGCCGACGT CCAACGTCAC CACGCTCCTC CGGTTCCTGG CCAAGATCGG CCTCGACGCC  GACGACCTCG TTTCCCTCTC CGGCGCGCAC ACGCTGGGCA TCGCGCACTG CACGTCGTTC CAGGAGCGGC TGTTCCCCGA GGACGACCCC ACCATGAACA AGTGGTTCGC GGGGCAGCTC  AAGCTCACCT GCCCCAGGCT CAACACCGAC AACACCACGG CGAATGACAT CCGTACGCCC GACGCCTTCG ACAACAAGTA CTACGTCGAC CTGATGAACC GGCAGGGGCT CTTCACCTCC  GACCAGGACC TGCACACGGA CGCCAGGACC AAGCCCATCG TCACCAGGTT CGCGGTCGAC CAGTCGGCGT TTTTCCAGCA GTTTGTAAAG TCCATGGTGA AGATGGGCCA GATCCAGGTG  CTCACCGGCG CCAAGGGCCA GATCCGCAGG GACTGCGCCG TGCCCAACGC TGCCCGCGCC GATGACGACC TCCCCTGGTC CGTCGTCCAG ACCGTCGTCG AGGCTGCTGA GAGCACGGTG  CTGTGATTGG CTAGCTAGTA GACTTAATTT GGTGTCTCTG CGCGCAGGCT TGTTTTCTTC GTTAACAATC GCGCTAGTGA TGGTTTGGAG GTCCGAGAGT GCGCGCCTAC CTGTTTGATT  CCGAGTGTCA GTACGTGACG AGTCGACGAC CTACTGTATC AGTTCTTCCA CAGAATAATA TATGGCGTGA GGGATTTTGT CCAATTGTAC TCAAGCTGAC CATGATGTCC ACCTACTTTT 
CTTTTTGTTT ATCCAGCTTA TTTTTTATCC ACTTTGTGTT AGAGCTGTTC TACGGTACCC CAGGAAAAAT ATAGGCCATC CATTTTGTAA ATCCAACGG 

Retrieve as FASTA