Entry information : ZmPrx79
Entry ID 789
Creation 2007-11-12 (Christophe Dunand)
Last sequence changes 2010-12-23 (Marie Brette (Scipio))
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-12-28 (Christophe Dunand)
Peroxidase information: ZmPrx79
Name ZmPrx79
Class Class III peroxidase    [Orthogroup: Prx096]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Seedlings
Silks
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx79
start..stop
S start..stop
SbPrx43 540 0 63..362 66..364
SbPrx42 536 0 62..362 61..360
SiPrx143 503 0 64..362 49..347
SiPrx119 490 2e-175 4..362 8..355
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 212853374..212853700 327 N° 2 212852517..212853278 762  
complement(join(212852517..212853278,212853374..212853700))


exon

Literature and cross-references ZmPrx79
Literature Qiu,F. et al., unpublished
DNA ref. GenBank:   AC193386.2 (99156..100337)
EST ref. GenBank:   BM078834 [3' end]
Cluster/Prediction ref. UniGene:   Zm.32932
Protein sequence: ZmPrx79
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362 (343)
PWM (Da):   %s   38714.83 (36835.7)  
PI (pH):   %s   9.07 (9.07) Peptide Signal:   %s   cut: 25 range:20-362
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARLGVLVLVALLAADTTAQLAQAQGSSSSYGSAPPPPPPTSPPSASPPAQTPPPAPTPPTPKLRYNFYKRSCPYAEDIIKQAVRNATNVNPGLGAGLIRMAFHDCFVRGCDGSVLLDATPANPRPEKLGPPNFPSLRGYEVVDAAKAALEKACPGVVSCADVVQFAARDAVFFLSGSKVLYSLPGGRFDGRVSFENETLRFLPPPSFNLSQLVQSFKVKGMSVDDLVVLSGSHTIGRSHCSSFSDRISTPPSDMNPALATVLKRQCPANPNFTNDPTVVQDIVTPDKLDNQYYWNVLRHNVLFKSDAALLTSTETARMVLENAGIRGRFERKFASAMLKMSLIEVKTAATGEIRKNCHVVN*

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs and genomic (chromo 2, intron 1). Cultivar="B73". FHDC is lacking in the DNA.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGGCTTGGCGTCCTCGTCTTGGTTGCGCTTCTCGCCGCTGACACCACAGCTCAACTTGCTCAAGCGCAAGGGTCCTCCTCCTCCTACGGCAGTGCTCCTCCTCCTCCTCCTCCA
ACTAGCCCGCCGAGCGCAAGCCCACCAGCCCAGACTCCACCACCGGCTCCTACTCCGCCAACGCCAAAGCTGAGGTACAACTTCTACAAGCGCTCGTGCCCTTACGCCGAGGACATCATC
AAGCAAGCCGTGAGGAACGCCACGAACGTCAACCCCGGCCTCGGCGCCGGCCTCATCCGCATGGCCTTCCACGACTGCTTCGTCCGG
GTACGTGAACCCCAATGCTAGCTGCCAAAATTT
GTCCGTGCATGCATGCAATGCACGCGTGAGTGACCACACCACGTGTTTGTTGTTGTTTGCAGGGCTGCGACGGCTCCGTCCTGCTCGACGCGACGCCGGCGAACCCGCGGCCGGAGAAGC
TCGGCCCGCCAAACTTTCCTAGCCTGCGCGGCTACGAGGTGGTGGACGCGGCCAAGGCGGCGCTCGAGAAGGCCTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCCAGTTCGCCGCTC
GCGACGCCGTCTTCTTCCTCAGCGGCTCCAAGGTGCTCTACAGCCTCCCCGGGGGCCGCTTCGACGGCAGGGTGTCCTTCGAGAACGAGACGCTCAGGTTCCTGCCGCCGCCGTCCTTCA
ACCTCTCCCAGCTCGTCCAGAGCTTCAAGGTCAAGGGCATGAGCGTCGACGACCTCGTCGTGCTCTCCGGCTCCCACACCATCGGCCGCTCCCACTGCTCCTCCTTCTCCGACCGCATCT
CCACGCCGCCCTCCGACATGAACCCTGCCCTCGCCACCGTGCTGAAGCGGCAGTGCCCGGCCAACCCCAACTTCACCAACGACCCCACGGTGGTGCAGGACATCGTCACCCCCGACAAGC
TGGACAACCAGTACTACTGGAACGTGCTACGTCACAATGTGCTGTTCAAATCCGACGCGGCCCTGCTGACGTCGACGGAGACGGCGAGGATGGTGCTCGAGAACGCCGGCATCCGAGGAA
GGTTTGAGAGGAAGTTCGCCAGCGCGATGCTCAAGATGTCGCTCATCGAGGTCAAGACCGCTGCCACCGGCGAGATCAGGAAGAACTGCCACGTCGTCAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGGCTTGGCGTCCTCGTCTTGGTTGCGCTTCTCGCCGCTGACACCACAGCTCAACTTGCTCAAGCGCAAGGGTCCTCCTCCTCCTACGGCAGTGCTCCTCCTCCTCCTCCTCCA
ACTAGCCCGCCGAGCGCAAGCCCACCAGCCCAGACTCCACCACCGGCTCCTACTCCGCCAACGCCAAAGCTGAGGTACAACTTCTACAAGCGCTCGTGCCCTTACGCCGAGGACATCATC
AAGCAAGCCGTGAGGAACGCCACGAACGTCAACCCCGGCCTCGGCGCCGGCCTCATCCGCATGGCCTTCCACGACTGCTTCGTCCGG
GGCTGCGACGGCTCCGTCCTGCTCGACGCGACG
CCGGCGAACCCGCGGCCGGAGAAGCTCGGCCCGCCAAACTTTCCTAGCCTGCGCGGCTACGAGGTGGTGGACGCGGCCAAGGCGGCGCTCGAGAAGGCCTGCCCGGGCGTCGTCTCCTGC
GCCGACGTCGTCCAGTTCGCCGCTCGCGACGCCGTCTTCTTCCTCAGCGGCTCCAAGGTGCTCTACAGCCTCCCCGGGGGCCGCTTCGACGGCAGGGTGTCCTTCGAGAACGAGACGCTC
AGGTTCCTGCCGCCGCCGTCCTTCAACCTCTCCCAGCTCGTCCAGAGCTTCAAGGTCAAGGGCATGAGCGTCGACGACCTCGTCGTGCTCTCCGGCTCCCACACCATCGGCCGCTCCCAC
TGCTCCTCCTTCTCCGACCGCATCTCCACGCCGCCCTCCGACATGAACCCTGCCCTCGCCACCGTGCTGAAGCGGCAGTGCCCGGCCAACCCCAACTTCACCAACGACCCCACGGTGGTG
CAGGACATCGTCACCCCCGACAAGCTGGACAACCAGTACTACTGGAACGTGCTACGTCACAATGTGCTGTTCAAATCCGACGCGGCCCTGCTGACGTCGACGGAGACGGCGAGGATGGTG
CTCGAGAACGCCGGCATCCGAGGAAGGTTTGAGAGGAAGTTCGCCAGCGCGATGCTCAAGATGTCGCTCATCGAGGTCAAGACCGCTGCCACCGGCGAGATCAGGAAGAACTGCCACGTC
GTCAATTAG

Retrieve as FASTA