Entry information : BdiPrx139 (Bradi5g27200)
Entry ID 7903
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx139 (Bradi5g27200)
Name (synonym) BdiPrx139 (Bradi5g27200)
Class Class III peroxidase    [Orthogroup: Prx068]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx139
start..stop
S start..stop
TaPrx66 447 2e-159 3..323 12..341
HvPrx03 445 1e-158 1..323 1..338
OsPrx64 433 1e-153 5..310 13..319
OsPrx63 428 7e-152 5..311 12..320
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28076791..28077765 975  
complement(join(28076791..28077765))


exon

Literature and cross-references BdiPrx139 (Bradi5g27200)
DNA ref. Phytozome 12:   Bd5 (28077765..28076791)
Protein sequence: BdiPrx139 (Bradi5g27200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (304)
PWM (Da):   %s   34224.35 (32315.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.4 (5.40) Peptide Signal:   %s   cut: 21 range:21-324
Sequence
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Send to Peroxiscan
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MATAMVAAVL LLLTISPAAA AALSPHFHAD SCPELESIVR TSVEAALEEE IALAAGLLRV FFHDCFPQGC DGSVFLTGRN SEQSLGPNLT LQPRALQLVD AIRAKAHAAC GPTVSCADIS  ALATRDAVVF SGGPNYTVPL GNLDSLTPAS AKAVMTLPSP ITSSVAALFE AFRTRGLVEL TDLVALSGVH TVGRAGCRFF ADRSAKQDDT FSKKLAANCS VEPDRLQNLD VITPDVFDNG 
YFKALMFNQG VFTSDMALVK DKDTAPIVKR FAGSKDKFFK QFVKSMEKLV NAPRPDGNVG EIRRSCSSPN GDDGEKEDFA VASA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron), no EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACGG CCATGGTCGC CGCCGTGCTA CTACTGCTCA CGATCTCCCC AGCAGCAGCA GCAGCACTGT CGCCGCACTT CCACGCCGAC TCATGCCCGG AGCTCGAATC CATAGTCCGC  ACCTCCGTCG AAGCCGCCCT CGAGGAAGAG ATCGCGCTCG CAGCCGGGCT CCTCCGGGTC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC GACGGCTCCG TCTTCCTCAC GGGCCGAAAC  TCCGAGCAAT CCCTCGGCCC GAACCTCACC CTGCAACCCC GAGCTCTGCA ACTCGTCGAC GCCATCCGGG CCAAGGCCCA CGCCGCCTGC GGCCCAACCG TCTCCTGCGC CGACATCTCC  GCCCTCGCCA CCCGGGACGC CGTCGTCTTC TCCGGAGGCC CAAACTACAC CGTCCCCCTC GGCAACCTCG ACAGCCTCAC CCCGGCATCC GCAAAGGCCG TCATGACGCT CCCGTCCCCG  ATCACCTCCA GCGTGGCAGC GCTCTTCGAG GCCTTCAGGA CACGTGGCCT GGTCGAGCTG ACGGACCTCG TGGCGCTCTC GGGCGTGCAC ACCGTGGGCC GCGCCGGGTG CCGGTTCTTC  GCCGACCGGT CGGCGAAGCA GGACGACACG TTCTCCAAGA AGCTCGCTGC CAATTGCAGC GTGGAGCCTG ATCGGTTGCA GAACCTGGAC GTGATCACGC CGGACGTGTT CGACAATGGG  TACTTTAAGG CGCTTATGTT TAACCAGGGC GTGTTCACCT CTGACATGGC GCTCGTGAAG GATAAAGACA CGGCGCCTAT TGTGAAGAGG TTTGCGGGGA GTAAGGACAA GTTTTTTAAG  CAGTTTGTCA AGTCTATGGA GAAGCTTGTT AACGCGCCTA GGCCCGACGG GAATGTTGGG GAGATCCGCC GTAGCTGCAG CAGCCCCAAT GGTGATGACG GCGAGAAGGA GGACTTTGCC 
GTGGCTTCTG CTTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACGG CCATGGTCGC CGCCGTGCTA CTACTGCTCA CGATCTCCCC AGCAGCAGCA GCAGCACTGT CGCCGCACTT CCACGCCGAC TCATGCCCGG AGCTCGAATC CATAGTCCGC  ACCTCCGTCG AAGCCGCCCT CGAGGAAGAG ATCGCGCTCG CAGCCGGGCT CCTCCGGGTC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC GACGGCTCCG TCTTCCTCAC GGGCCGAAAC  TCCGAGCAAT CCCTCGGCCC GAACCTCACC CTGCAACCCC GAGCTCTGCA ACTCGTCGAC GCCATCCGGG CCAAGGCCCA CGCCGCCTGC GGCCCAACCG TCTCCTGCGC CGACATCTCC  GCCCTCGCCA CCCGGGACGC CGTCGTCTTC TCCGGAGGCC CAAACTACAC CGTCCCCCTC GGCAACCTCG ACAGCCTCAC CCCGGCATCC GCAAAGGCCG TCATGACGCT CCCGTCCCCG  ATCACCTCCA GCGTGGCAGC GCTCTTCGAG GCCTTCAGGA CACGTGGCCT GGTCGAGCTG ACGGACCTCG TGGCGCTCTC GGGCGTGCAC ACCGTGGGCC GCGCCGGGTG CCGGTTCTTC  GCCGACCGGT CGGCGAAGCA GGACGACACG TTCTCCAAGA AGCTCGCTGC CAATTGCAGC GTGGAGCCTG ATCGGTTGCA GAACCTGGAC GTGATCACGC CGGACGTGTT CGACAATGGG  TACTTTAAGG CGCTTATGTT TAACCAGGGC GTGTTCACCT CTGACATGGC GCTCGTGAAG GATAAAGACA CGGCGCCTAT TGTGAAGAGG TTTGCGGGGA GTAAGGACAA GTTTTTTAAG  CAGTTTGTCA AGTCTATGGA GAAGCTTGTT AACGCGCCTA GGCCCGACGG GAATGTTGGG GAGATCCGCC GTAGCTGCAG CAGCCCCAAT GGTGATGACG GCGAGAAGGA GGACTTTGCC 
GTGGCTTCTG CTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACGG CCATGGTCGC CGCCGTGCTA CTACTGCTCA CGATCTCCCC AGCAGCAGCA GCAGCACTGT CGCCGCACTT CCACGCCGAC TCATGCCCGG AGCTCGAATC CATAGTCCGC  ACCTCCGTCG AAGCCGCCCT CGAGGAAGAG ATCGCGCTCG CAGCCGGGCT CCTCCGGGTC TTCTTCCACG ACTGCTTCCC GCAGGGCTGC GACGGCTCCG TCTTCCTCAC GGGCCGAAAC  TCCGAGCAAT CCCTCGGCCC GAACCTCACC CTGCAACCCC GAGCTCTGCA ACTCGTCGAC GCCATCCGGG CCAAGGCCCA CGCCGCCTGC GGCCCAACCG TCTCCTGCGC CGACATCTCC  GCCCTCGCCA CCCGGGACGC CGTCGTCTTC TCCGGAGGCC CAAACTACAC CGTCCCCCTC GGCAACCTCG ACAGCCTCAC CCCGGCATCC GCAAAGGCCG TCATGACGCT CCCGTCCCCG  ATCACCTCCA GCGTGGCAGC GCTCTTCGAG GCCTTCAGGA CACGTGGCCT GGTCGAGCTG ACGGACCTCG TGGCGCTCTC GGGCGTGCAC ACCGTGGGCC GCGCCGGGTG CCGGTTCTTC  GCCGACCGGT CGGCGAAGCA GGACGACACG TTCTCCAAGA AGCTCGCTGC CAATTGCAGC GTGGAGCCTG ATCGGTTGCA GAACCTGGAC GTGATCACGC CGGACGTGTT CGACAATGGG  TACTTTAAGG CGCTTATGTT TAACCAGGGC GTGTTCACCT CTGACATGGC GCTCGTGAAG GATAAAGACA CGGCGCCTAT TGTGAAGAGG TTTGCGGGGA GTAAGGACAA GTTTTTTAAG  CAGTTTGTCA AGTCTATGGA GAAGCTTGTT AACGCGCCTA GGCCCGACGG GAATGTTGGG GAGATCCGCC GTAGCTGCAG CAGCCCCAAT GGTGATGACG GCGAGAAGGA GGACTTTGCC  GTGGCTTCTG CTTGAATGCT TGGTTGATAG TTTGTCACTT GATTTGTGTG CGTGTAACGG CCGTGCGTTA GCGTGCAAGG CTGGCTAGCT ATGATCGACA GTTGAGTGTG TCGGCCGTGT 
TCTGTTTC 

Retrieve as FASTA