Entry information : BdiPrx141 (bradi5g27220)
Entry ID 7905
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx141 (bradi5g27220)
Name (synonym) BdiPrx141 (bradi5g27220)
Class Class III peroxidase    [Orthogroup: Prx211]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx141
start..stop
S start..stop
TaPrx71 454 2e-161 19..326 24..332
TaPrx66 449 5e-160 9..338 18..341
HvPrx03 449 9e-160 1..338 1..338
HvPrx46 439 3e-156 32..316 40..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28086637..28087653 1017  
join(28086637..28087653)


exon

Literature and cross-references BdiPrx141 (bradi5g27220)
DNA ref. Phytozome 12:   Bd5 (28086637..28087653)
Protein sequence: BdiPrx141 (bradi5g27220)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338 (317)
PWM (Da):   %s   35637.1 (33551.8) Transmb domain:   %s   i7-26o
PI (pH):   %s   6.99 (6.99) Peptide Signal:   %s   cut: 22 range:22-338
Sequence
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Send to Peroxiscan
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MANSLPIAVL LLLLLSPAAL ATAVFPDSGD SFHAVSCPQL DTIVLTTVQA ALRQEIALAA GLIRIFFHDC FPQGCDASVY LMGTGADEIS LGPNLTLQRR AMQLVESIRA KAHAACGPTV  SCADVSALAT RAAVVASGGP SYSVPLGQLD SFAPAPRDKV LDLPGPRTAS VAELVATFAT RGMADVADLV ALSGAHTVGR SQCDSFADRS GRMDDTFSRK LAANCSKHKD RLQNLDVVTP 
DLFDNGYYKA LTFNQGVFTS DMALIKNRTS AAIVRQFAES KEAFFAQFAR SMTKLANAPR PGGNVGEIRR NCFTRNVRQG ADATIELAGE EEGFKASA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron), no EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAACT CACTGCCCAT CGCCGTGCTC CTTCTGCTGC TGCTCTCCCC AGCTGCTCTC GCCACGGCCG TCTTCCCCGA CTCCGGTGAC TCCTTCCACG CCGTGTCCTG CCCGCAGCTG  GACACCATCG TGCTCACCAC CGTGCAAGCG GCGCTCCGTC AGGAGATCGC TCTCGCCGCC GGCCTCATCC GGATCTTCTT CCACGACTGC TTCCCCCAGG GCTGCGACGC CTCCGTGTAC  CTCATGGGCA CGGGCGCCGA CGAGATCTCC CTGGGCCCGA ACCTCACGCT CCAACGCCGG GCCATGCAGC TCGTGGAGTC CATCCGGGCC AAGGCCCACG CCGCCTGCGG CCCAACCGTC  TCCTGCGCCG ACGTCTCCGC CCTGGCAACC CGGGCCGCCG TCGTCGCCTC CGGCGGGCCG TCCTACTCCG TGCCCCTCGG CCAGCTCGAC AGCTTCGCCC CGGCCCCCCG GGACAAGGTG  TTGGACCTCC CGGGGCCCAG GACGGCCAGC GTGGCGGAAC TCGTGGCGAC GTTCGCGACG CGTGGCATGG CCGACGTGGC GGACCTCGTG GCGCTCTCCG GCGCGCACAC CGTCGGCCGC  TCCCAGTGCG ACTCCTTCGC TGACAGGTCG GGACGCATGG ACGACACCTT CTCCAGGAAG CTGGCAGCCA ACTGCAGCAA GCACAAGGAC CGCCTGCAGA ACCTCGACGT CGTCACCCCT  GATTTGTTTG ATAACGGGTA TTACAAGGCG CTGACGTTTA ACCAGGGCGT GTTCACCTCT GACATGGCGC TCATCAAGAA CAGGACCTCG GCCGCCATTG TCAGGCAGTT CGCGGAGAGC  AAGGAGGCGT TTTTTGCGCA GTTTGCGAGG TCCATGACCA AGCTGGCTAA CGCGCCCAGG CCGGGGGGTA ATGTCGGTGA GATCCGCCGG AACTGCTTCA CGCGCAACGT CCGCCAGGGC 
GCGGATGCGA CCATCGAGCT CGCCGGGGAA GAAGAGGGAT TCAAGGCTTC AGCTTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAACT CACTGCCCAT CGCCGTGCTC CTTCTGCTGC TGCTCTCCCC AGCTGCTCTC GCCACGGCCG TCTTCCCCGA CTCCGGTGAC TCCTTCCACG CCGTGTCCTG CCCGCAGCTG  GACACCATCG TGCTCACCAC CGTGCAAGCG GCGCTCCGTC AGGAGATCGC TCTCGCCGCC GGCCTCATCC GGATCTTCTT CCACGACTGC TTCCCCCAGG GCTGCGACGC CTCCGTGTAC  CTCATGGGCA CGGGCGCCGA CGAGATCTCC CTGGGCCCGA ACCTCACGCT CCAACGCCGG GCCATGCAGC TCGTGGAGTC CATCCGGGCC AAGGCCCACG CCGCCTGCGG CCCAACCGTC  TCCTGCGCCG ACGTCTCCGC CCTGGCAACC CGGGCCGCCG TCGTCGCCTC CGGCGGGCCG TCCTACTCCG TGCCCCTCGG CCAGCTCGAC AGCTTCGCCC CGGCCCCCCG GGACAAGGTG  TTGGACCTCC CGGGGCCCAG GACGGCCAGC GTGGCGGAAC TCGTGGCGAC GTTCGCGACG CGTGGCATGG CCGACGTGGC GGACCTCGTG GCGCTCTCCG GCGCGCACAC CGTCGGCCGC  TCCCAGTGCG ACTCCTTCGC TGACAGGTCG GGACGCATGG ACGACACCTT CTCCAGGAAG CTGGCAGCCA ACTGCAGCAA GCACAAGGAC CGCCTGCAGA ACCTCGACGT CGTCACCCCT  GATTTGTTTG ATAACGGGTA TTACAAGGCG CTGACGTTTA ACCAGGGCGT GTTCACCTCT GACATGGCGC TCATCAAGAA CAGGACCTCG GCCGCCATTG TCAGGCAGTT CGCGGAGAGC  AAGGAGGCGT TTTTTGCGCA GTTTGCGAGG TCCATGACCA AGCTGGCTAA CGCGCCCAGG CCGGGGGGTA ATGTCGGTGA GATCCGCCGG AACTGCTTCA CGCGCAACGT CCGCCAGGGC 
GCGGATGCGA CCATCGAGCT CGCCGGGGAA GAAGAGGGAT TCAAGGCTTC AGCTTGA 

Retrieve as FASTA  
cDNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GAGGAAGCCA CAAGCCCTCT TCTTCCTCCT CTAGTCAAGC TAGCTAGCTA GCATATACCA ATAATCCACG GCCATGGCTA ACTCACTGCC CATCGCCGTG CTCCTTCTGC TGCTGCTCTC  CCCAGCTGCT CTCGCCACGG CCGTCTTCCC CGACTCCGGT GACTCCTTCC ACGCCGTGTC CTGCCCGCAG CTGGACACCA TCGTGCTCAC CACCGTGCAA GCGGCGCTCC GTCAGGAGAT  CGCTCTCGCC GCCGGCCTCA TCCGGATCTT CTTCCACGAC TGCTTCCCCC AGGGCTGCGA CGCCTCCGTG TACCTCATGG GCACGGGCGC CGACGAGATC TCCCTGGGCC CGAACCTCAC  GCTCCAACGC CGGGCCATGC AGCTCGTGGA GTCCATCCGG GCCAAGGCCC ACGCCGCCTG CGGCCCAACC GTCTCCTGCG CCGACGTCTC CGCCCTGGCA ACCCGGGCCG CCGTCGTCGC  CTCCGGCGGG CCGTCCTACT CCGTGCCCCT CGGCCAGCTC GACAGCTTCG CCCCGGCCCC CCGGGACAAG GTGTTGGACC TCCCGGGGCC CAGGACGGCC AGCGTGGCGG AACTCGTGGC  GACGTTCGCG ACGCGTGGCA TGGCCGACGT GGCGGACCTC GTGGCGCTCT CCGGCGCGCA CACCGTCGGC CGCTCCCAGT GCGACTCCTT CGCTGACAGG TCGGGACGCA TGGACGACAC  CTTCTCCAGG AAGCTGGCAG CCAACTGCAG CAAGCACAAG GACCGCCTGC AGAACCTCGA CGTCGTCACC CCTGATTTGT TTGATAACGG GTATTACAAG GCGCTGACGT TTAACCAGGG  CGTGTTCACC TCTGACATGG CGCTCATCAA GAACAGGACC TCGGCCGCCA TTGTCAGGCA GTTCGCGGAG AGCAAGGAGG CGTTTTTTGC GCAGTTTGCG AGGTCCATGA CCAAGCTGGC  TAACGCGCCC AGGCCGGGGG GTAATGTCGG TGAGATCCGC CGGAACTGCT TCACGCGCAA CGTCCGCCAG GGCGCGGATG CGACCATCGA GCTCGCCGGG GAAGAAGAGG GATTCAAGGC  TTCAGCTTGA TCTTGAAGGT TGAAGATCAA GCTTTCCTTT CTAAATTAGT AGTGCTTACT TAATGTCTGT CGTCTGTTTC TTCAGAGCTT GTACGTGTTT CCTGTCTTTG TTTTTGGTCC  TTCGCGGGTA GGATGCAATA AAGAAACGAC TTAAGGTGGT ACTTGCAATT CTGTTTGGAT CGGGCGGCTA CATCTGCTAC GGTGTATGAG TTGAATCTTC AACTCGGCCA TTAATAACAT 
CAACATCAGA CAACAATTTG CCACACAATT AAAGGGCT 

Retrieve as FASTA