Entry information : BdiPrx41 (Bradi1g61550)
Entry ID 7913
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx41 (Bradi1g61550)
Name (synonym) BdiPrx41 (Bradi1g61550)
Class Class III peroxidase    [Orthogroup: Prx123]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx41
start..stop
S start..stop
SiPrx170 545 0 3..324 2..323
SiPrx172 541 0 3..323 2..322
OsPrx44 533 0 1..323 1..323
OsPrx42 506 0 1..323 1..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 60908122..60909096 975  
complement(join(60908122..60909096))


exon

Literature and cross-references BdiPrx41 (Bradi1g61550)
DNA ref. Phytozome 12:   Bd1 (60909096..60908122)
Protein sequence: BdiPrx41 (Bradi1g61550)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (300)
PWM (Da):   %s   34267.63 (31934.4)  
PI (pH):   %s   8.41 (8.39) Peptide Signal:   %s   cut: 25 range:25-324
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASASLKLSI ALTCALLLSS ACQGLKVGHY KKTCPKVEAI VRDEVKKFVY KNAGIGAGLI RLFFHDCFVE GCDGSVLLDP TPANPQPEKL SPPNFPSLRG FDVIDAAKDA VEKACPGVVS  CADIVAFAGR DAAYFLSRLT VKIDMPAGRL DGRVSSSTAA LNDLPPPFAN LSQLIANFAA KGLSAEDMVV LSGAHTIGVS HCSAFVSDRL AVPSDINTGF ANILRKQCPA NPNPANDPTV 
NQDLVTANAL DNQYYKNVLA HKVLFLSDAA LLASPATTQM VRDNANIPGQ WEDKFKKAMV KMSAIGVKTG NQGEIRKSCR VVNH 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, no intron), no EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCGG CTTCGCTTAA GCTTTCCATA GCGCTGACAT GCGCACTGCT CTTGTCCTCG GCGTGCCAAG GCCTGAAGGT GGGCCACTAC AAGAAGACAT GCCCCAAAGT GGAGGCCATC  GTGAGGGATG AGGTGAAGAA GTTCGTCTAC AAGAACGCCG GCATCGGCGC CGGGCTCATC CGCTTGTTCT TCCACGACTG CTTCGTGGAG GGGTGTGATG GCTCCGTCCT GCTGGACCCG  ACCCCGGCCA ACCCGCAGCC GGAGAAGCTC AGCCCGCCCA ATTTCCCCAG CCTCCGTGGC TTCGACGTGA TCGACGCCGC CAAGGACGCG GTAGAGAAGG CGTGCCCTGG CGTCGTCTCC  TGCGCCGATA TCGTCGCTTT CGCTGGACGC GACGCGGCCT ACTTCCTCAG CAGACTCACG GTCAAGATTG ACATGCCGGC GGGCCGCCTC GACGGTCGCG TTTCCAGTTC CACGGCGGCG  CTCAACGACC TGCCGCCACC GTTCGCTAAC CTCAGCCAGC TCATCGCCAA CTTCGCTGCC AAAGGTCTCA GCGCTGAGGA CATGGTTGTG CTCTCTGGCG CGCACACCAT CGGGGTCTCC  CATTGCTCGG CCTTCGTGTC CGACCGCCTC GCCGTCCCCT CCGACATCAA CACCGGCTTT GCCAACATCC TGCGGAAGCA ATGCCCCGCC AACCCGAACC CGGCCAATGA CCCCACGGTG  AATCAGGATT TGGTGACAGC CAATGCGCTG GACAACCAGT ACTACAAGAA CGTCTTGGCG CACAAGGTGC TCTTCCTGTC GGACGCCGCT CTGCTTGCCT CGCCGGCAAC GACGCAGATG  GTGCGCGACA ATGCCAACAT CCCCGGCCAA TGGGAGGACA AGTTCAAGAA GGCGATGGTC AAGATGTCTG CCATCGGTGT CAAGACCGGC AACCAAGGCG AGATCAGGAA GTCCTGCAGG 
GTCGTTAACC ACTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCGG CTTCGCTTAA GCTTTCCATA GCGCTGACAT GCGCACTGCT CTTGTCCTCG GCGTGCCAAG GCCTGAAGGT GGGCCACTAC AAGAAGACAT GCCCCAAAGT GGAGGCCATC  GTGAGGGATG AGGTGAAGAA GTTCGTCTAC AAGAACGCCG GCATCGGCGC CGGGCTCATC CGCTTGTTCT TCCACGACTG CTTCGTGGAG GGGTGTGATG GCTCCGTCCT GCTGGACCCG  ACCCCGGCCA ACCCGCAGCC GGAGAAGCTC AGCCCGCCCA ATTTCCCCAG CCTCCGTGGC TTCGACGTGA TCGACGCCGC CAAGGACGCG GTAGAGAAGG CGTGCCCTGG CGTCGTCTCC  TGCGCCGATA TCGTCGCTTT CGCTGGACGC GACGCGGCCT ACTTCCTCAG CAGACTCACG GTCAAGATTG ACATGCCGGC GGGCCGCCTC GACGGTCGCG TTTCCAGTTC CACGGCGGCG  CTCAACGACC TGCCGCCACC GTTCGCTAAC CTCAGCCAGC TCATCGCCAA CTTCGCTGCC AAAGGTCTCA GCGCTGAGGA CATGGTTGTG CTCTCTGGCG CGCACACCAT CGGGGTCTCC  CATTGCTCGG CCTTCGTGTC CGACCGCCTC GCCGTCCCCT CCGACATCAA CACCGGCTTT GCCAACATCC TGCGGAAGCA ATGCCCCGCC AACCCGAACC CGGCCAATGA CCCCACGGTG  AATCAGGATT TGGTGACAGC CAATGCGCTG GACAACCAGT ACTACAAGAA CGTCTTGGCG CACAAGGTGC TCTTCCTGTC GGACGCCGCT CTGCTTGCCT CGCCGGCAAC GACGCAGATG  GTGCGCGACA ATGCCAACAT CCCCGGCCAA TGGGAGGACA AGTTCAAGAA GGCGATGGTC AAGATGTCTG CCATCGGTGT CAAGACCGGC AACCAAGGCG AGATCAGGAA GTCCTGCAGG 
GTCGTTAACC ACTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTCATCTGCT CCTAGCTCTC TTTAGCGCAC ACATAACACA AAGGCTGATT CGTAAGAAGA AAGAAGTCCA ATGGCTTCGG CTTCGCTTAA GCTTTCCATA GCGCTGACAT GCGCACTGCT  CTTGTCCTCG GCGTGCCAAG GCCTGAAGGT GGGCCACTAC AAGAAGACAT GCCCCAAAGT GGAGGCCATC GTGAGGGATG AGGTGAAGAA GTTCGTCTAC AAGAACGCCG GCATCGGCGC  CGGGCTCATC CGCTTGTTCT TCCACGACTG CTTCGTGGAG GGGTGTGATG GCTCCGTCCT GCTGGACCCG ACCCCGGCCA ACCCGCAGCC GGAGAAGCTC AGCCCGCCCA ATTTCCCCAG  CCTCCGTGGC TTCGACGTGA TCGACGCCGC CAAGGACGCG GTAGAGAAGG CGTGCCCTGG CGTCGTCTCC TGCGCCGATA TCGTCGCTTT CGCTGGACGC GACGCGGCCT ACTTCCTCAG  CAGACTCACG GTCAAGATTG ACATGCCGGC GGGCCGCCTC GACGGTCGCG TTTCCAGTTC CACGGCGGCG CTCAACGACC TGCCGCCACC GTTCGCTAAC CTCAGCCAGC TCATCGCCAA  CTTCGCTGCC AAAGGTCTCA GCGCTGAGGA CATGGTTGTG CTCTCTGGCG CGCACACCAT CGGGGTCTCC CATTGCTCGG CCTTCGTGTC CGACCGCCTC GCCGTCCCCT CCGACATCAA  CACCGGCTTT GCCAACATCC TGCGGAAGCA ATGCCCCGCC AACCCGAACC CGGCCAATGA CCCCACGGTG AATCAGGATT TGGTGACAGC CAATGCGCTG GACAACCAGT ACTACAAGAA  CGTCTTGGCG CACAAGGTGC TCTTCCTGTC GGACGCCGCT CTGCTTGCCT CGCCGGCAAC GACGCAGATG GTGCGCGACA ATGCCAACAT CCCCGGCCAA TGGGAGGACA AGTTCAAGAA  GGCGATGGTC AAGATGTCTG CCATCGGTGT CAAGACCGGC AACCAAGGCG AGATCAGGAA GTCCTGCAGG GTCGTTAACC ACTGATCCCA TCATCATCGA TCAGTGGATT CTCGTACTGC  ACATCGGTGC AATCAGTTTA CCTTGGTTTG TTAATTCCGG TGTCACGCAT CTCTCACCAC TACGACACAC GTGGGCTGGG CTTGACTTCA ATATGAGTTT GTGACTTCCC TCAGATTTCC  GGCAAGTACT ACCGTGTTGT TTCTTTCGTT ATTTTGGCAA CGTGTTATTG CCGCGCGCTT GCACGCCTTC TTGTTCTGTT CTTGGAGAAT GCATATTTGC CACGCCCCAT GTCACTGGCA  CTGAGTAATA GGAATATACT TGAAAAACTT CCCTCGATTT TGTCTATTGT AATTCTCGAT ATTGGCACAC CAGAGTCTTA GAGGCTTCGG GCCATCTTGG GTTGGGAGTC CTAAACATCT 
TCATCGTAAG AGGGATGGTG GTAGACATGA TCGCTGTCCT CGTCTTCATG TAACAGAAAA GAAGGCAAAT TCTCACGTAC CTAATACTCC 

Retrieve as FASTA