Entry information : BdiPrx129 (Bradi5g12710)
Entry ID 7923
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx129 (Bradi5g12710)
Name (synonym) BdiPrx129 (Bradi5g12710)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx129
start..stop
S start..stop
SiPrx52 516 0 30..333 33..336
OsPrx55 516 0 32..332 35..335
HvPrx34 514 0 22..324 38..344
SbPrx92 504 0 30..333 36..345
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16227178..16228179 1002  
complement(join(16227178..16228179))


exon

Literature and cross-references BdiPrx129 (Bradi5g12710)
DNA ref. Phytozome 12:   Bd5 (16228179..16227178)
Protein sequence: BdiPrx129 (Bradi5g12710)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (305)
PWM (Da):   %s   35621.24 (32891.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.72 (8.38) Peptide Signal:   %s   cut: 29 range:29-333
Sequence
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Send to Peroxiscan
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MGTLPRRLLF SLALLLLAAA AAPGAVAAGR LSTSYYRRSC PRVEQIVSDV VAAKQRANPS TAAGTLRLFF HDCFVSGCDA SVLVSPLSSD QTPERAAEIN LSLPGDAFDA VARAKTALEA  ACPGAVSCAD ILALAARDLV GILGGPRFPV FLGRRDARRS DARDVEGNLP RTNMSARAMA VLFARKGITP QEMVALAGAH TVGFSHCAEF AHRLYNYGGA DGYDPSLNPA FARALQSSCT 
GYDKDPTISI FNDIVTPRDF DELYYKNLPR GLGLLASDAA LWEYGPTRVF VQRYADNRTA FFEDFAKAMQ KLGTVGVKTG RQGVVRRQCD ILD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no intron), no EST.
DNA
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ATGGGCACGC TTCCCCGCCG CCTCCTCTTC TCCCTCGCCC TCCTCCTCCT CGCCGCCGCC GCGGCCCCCG GCGCGGTGGC GGCGGGCAGG CTGTCGACGT CGTACTACCG CCGCAGCTGC  CCGCGCGTCG AGCAGATCGT CTCGGACGTC GTCGCCGCCA AGCAGCGCGC CAACCCTTCC ACGGCGGCGG GCACGCTGCG GCTCTTCTTC CACGACTGCT TCGTCTCCGG CTGCGACGCC  TCCGTGCTCG TCTCCCCGCT CTCCTCCGAC CAGACCCCCG AGCGCGCCGC GGAGATCAAC CTCTCCCTCC CCGGGGATGC CTTCGACGCC GTCGCCCGCG CCAAGACCGC GCTGGAGGCC  GCCTGCCCGG GCGCCGTCTC CTGCGCCGAC ATCCTCGCGC TCGCCGCGCG CGACCTCGTC GGGATCCTGG GCGGCCCGCG CTTCCCGGTC TTCCTCGGCC GCCGCGACGC GCGCCGCTCC  GACGCGCGCG ACGTCGAGGG GAACCTCCCG CGGACCAACA TGTCGGCGCG CGCCATGGCC GTCCTCTTCG CCCGCAAGGG GATCACCCCG CAGGAGATGG TGGCACTGGC CGGCGCGCAC  ACCGTGGGGT TCTCTCACTG CGCCGAGTTC GCGCACCGGC TCTACAACTA CGGGGGCGCC GACGGCTACG ATCCGTCCCT GAACCCGGCG TTCGCGCGGG CGCTGCAGAG CTCCTGCACG  GGCTACGACA AGGACCCAAC CATCTCCATC TTCAACGACA TCGTCACACC CAGGGACTTC GACGAGCTCT ACTACAAGAA CCTGCCCAGG GGACTCGGGC TGCTCGCCTC CGACGCCGCG  CTCTGGGAGT ACGGGCCCAC CAGGGTCTTC GTCCAGCGCT ACGCCGACAA CCGGACGGCC TTCTTCGAGG ACTTCGCCAA GGCGATGCAG AAGCTCGGCA CCGTCGGCGT CAAGACCGGG 
CGGCAGGGCG TCGTCAGGCG CCAATGCGAC ATCCTCGACT GA 

Retrieve as FASTA  
CDS
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ATGGGCACGC TTCCCCGCCG CCTCCTCTTC TCCCTCGCCC TCCTCCTCCT CGCCGCCGCC GCGGCCCCCG GCGCGGTGGC GGCGGGCAGG CTGTCGACGT CGTACTACCG CCGCAGCTGC  CCGCGCGTCG AGCAGATCGT CTCGGACGTC GTCGCCGCCA AGCAGCGCGC CAACCCTTCC ACGGCGGCGG GCACGCTGCG GCTCTTCTTC CACGACTGCT TCGTCTCCGG CTGCGACGCC  TCCGTGCTCG TCTCCCCGCT CTCCTCCGAC CAGACCCCCG AGCGCGCCGC GGAGATCAAC CTCTCCCTCC CCGGGGATGC CTTCGACGCC GTCGCCCGCG CCAAGACCGC GCTGGAGGCC  GCCTGCCCGG GCGCCGTCTC CTGCGCCGAC ATCCTCGCGC TCGCCGCGCG CGACCTCGTC GGGATCCTGG GCGGCCCGCG CTTCCCGGTC TTCCTCGGCC GCCGCGACGC GCGCCGCTCC  GACGCGCGCG ACGTCGAGGG GAACCTCCCG CGGACCAACA TGTCGGCGCG CGCCATGGCC GTCCTCTTCG CCCGCAAGGG GATCACCCCG CAGGAGATGG TGGCACTGGC CGGCGCGCAC  ACCGTGGGGT TCTCTCACTG CGCCGAGTTC GCGCACCGGC TCTACAACTA CGGGGGCGCC GACGGCTACG ATCCGTCCCT GAACCCGGCG TTCGCGCGGG CGCTGCAGAG CTCCTGCACG  GGCTACGACA AGGACCCAAC CATCTCCATC TTCAACGACA TCGTCACACC CAGGGACTTC GACGAGCTCT ACTACAAGAA CCTGCCCAGG GGACTCGGGC TGCTCGCCTC CGACGCCGCG  CTCTGGGAGT ACGGGCCCAC CAGGGTCTTC GTCCAGCGCT ACGCCGACAA CCGGACGGCC TTCTTCGAGG ACTTCGCCAA GGCGATGCAG AAGCTCGGCA CCGTCGGCGT CAAGACCGGG 
CGGCAGGGCG TCGTCAGGCG CCAATGCGAC ATCCTCGACT GA 

Retrieve as FASTA  
cDNA
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CCCATCGCCC CATCCACCTC TCCGTCCTCC AAATCGAGCC AAAGAACACC ACCAGTCCTC TTTCTCTCTC TCCATGGGCA CGCTTCCCCG CCGCCTCCTC TTCTCCCTCG CCCTCCTCCT  CCTCGCCGCC GCCGCGGCCC CCGGCGCGGT GGCGGCGGGC AGGCTGTCGA CGTCGTACTA CCGCCGCAGC TGCCCGCGCG TCGAGCAGAT CGTCTCGGAC GTCGTCGCCG CCAAGCAGCG  CGCCAACCCT TCCACGGCGG CGGGCACGCT GCGGCTCTTC TTCCACGACT GCTTCGTCTC CGGCTGCGAC GCCTCCGTGC TCGTCTCCCC GCTCTCCTCC GACCAGACCC CCGAGCGCGC  CGCGGAGATC AACCTCTCCC TCCCCGGGGA TGCCTTCGAC GCCGTCGCCC GCGCCAAGAC CGCGCTGGAG GCCGCCTGCC CGGGCGCCGT CTCCTGCGCC GACATCCTCG CGCTCGCCGC  GCGCGACCTC GTCGGGATCC TGGGCGGCCC GCGCTTCCCG GTCTTCCTCG GCCGCCGCGA CGCGCGCCGC TCCGACGCGC GCGACGTCGA GGGGAACCTC CCGCGGACCA ACATGTCGGC  GCGCGCCATG GCCGTCCTCT TCGCCCGCAA GGGGATCACC CCGCAGGAGA TGGTGGCACT GGCCGGCGCG CACACCGTGG GGTTCTCTCA CTGCGCCGAG TTCGCGCACC GGCTCTACAA  CTACGGGGGC GCCGACGGCT ACGATCCGTC CCTGAACCCG GCGTTCGCGC GGGCGCTGCA GAGCTCCTGC ACGGGCTACG ACAAGGACCC AACCATCTCC ATCTTCAACG ACATCGTCAC  ACCCAGGGAC TTCGACGAGC TCTACTACAA GAACCTGCCC AGGGGACTCG GGCTGCTCGC CTCCGACGCC GCGCTCTGGG AGTACGGGCC CACCAGGGTC TTCGTCCAGC GCTACGCCGA  CAACCGGACG GCCTTCTTCG AGGACTTCGC CAAGGCGATG CAGAAGCTCG GCACCGTCGG CGTCAAGACC GGGCGGCAGG GCGTCGTCAG GCGCCAATGC GACATCCTCG ACTGACCGGC  GACTTAATTG ACGGCGTTGT TGCCTCATGT GTAATGTTTG CTACTCTAGT AAGATTGGTC AAATTTAGGA TTGGATTTGG GGGTGGGCTG CTCTGATTCC TGAACGGAAC TTTTGAATCG  CGATGCGTTT TGACTGAGTG CTGCAGCAGA ATGAAAAGCG GGTAACGGAG CCCACCCATG GAATTCAACG AGTGGCATCT TTATGTTAAA AGTCGTTATC GGCTTATCGC TGCACTTGTG 
ACTTGATCAT GTGCATGGCT GCATCCAATC ATGCGTGTAG TCTTTCCTGT CTTGTAGTCT TCTGCAGTTC TGCACGCTAC GATGGAACAT AGTAGTGTTA TCG 

Retrieve as FASTA