Entry information : BdiPrx142 (Bradi5g27690)
Entry ID 7926
Creation 2011-01-17 (Toky Ramarohetra)
Last sequence changes 2011-01-17 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx142 (Bradi5g27690)
Name (synonym) BdiPrx142 (Bradi5g27690)
Class Class III peroxidase     [Orthogroup: Prx028]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx142
start..stop
S start..stop
OsPrx117 367 9e-129 1..288 28..315
BdiPrx104 345 9e-120 1..288 32..319
SiPrx65 342 6e-119 1..288 31..318
SbPrx102 336 2e-116 1..288 31..318
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28362592..28363458 867  
complement(join(28362592..28363458))


exon

Literature and cross-references BdiPrx142 (Bradi5g27690)
DNA ref. Phytozome 12:   Bd5 (28363458..28362592)
EST ref. GenBank:   DV487513.1 [5' end]
Protein sequence: BdiPrx142 (Bradi5g27690)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   288
PWM (Da):   %s   30530.04  
PI (pH):   %s   5.59
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEYYSMSCPY AEMIVRDVVG EAIYKDPTLA ASLIRLHFHD CFVRGCDASV LLDSTHKATA EKDALTNKSL RGFEVIDAVK AALEDRCPGT VSCADVLALA ARDSVYMAGG PYYDVATGRR  DGFVSDAADT SALPAATLQV SELKTVFASH GFTVAELVAL SGAHTLGQAH CANFKNRVSG NKLDPTLDAQ MAATLATTCK KGGDGATAKL DATSNVFDTD YFRGIQGSKA LLTSDQTLAG 
SPDTSSLVHM FADSPDMFFD TFIQGMIKMG TLDLNPKGNV RKSCRIIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron), 1 EST. Cultivar="Bd21".Incorrect prediction from phytozome.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTACT ACTCCATGAG CTGCCCCTAC GCGGAGATGA TCGTCCGAGA CGTGGTGGGC GAGGCCATCT ACAAGGACCC AACCCTCGCC GCCAGCCTCA TCCGACTCCA CTTCCACGAC  TGCTTCGTCC GCGGCTGCGA CGCCTCCGTC CTCCTCGATT CCACCCACAA GGCCACCGCC GAGAAGGACG CCCTCACCAA CAAGAGCCTC CGGGGCTTCG AGGTCATCGA CGCCGTCAAG  GCCGCCCTCG AGGACCGCTG CCCCGGCACC GTCTCCTGCG CCGACGTCCT CGCGCTGGCC GCCAGAGACT CCGTCTACAT GGCCGGGGGG CCCTACTACG ACGTGGCCAC GGGGCGGCGC  GACGGCTTCG TCTCCGACGC GGCGGACACC AGCGCGCTGC CCGCAGCCAC ACTCCAGGTG TCGGAGCTCA AGACCGTGTT CGCTTCCCAT GGGTTCACCG TGGCAGAGCT GGTGGCCCTG  TCCGGGGCGC ATACGCTGGG GCAGGCCCAC TGCGCAAACT TCAAGAACCG CGTCAGCGGC AACAAGTTGG ACCCCACGCT GGACGCCCAG ATGGCGGCCA CGTTGGCGAC CACGTGCAAG  AAAGGAGGCG ACGGGGCCAC AGCCAAGCTG GACGCCACCA GCAACGTCTT CGACACGGAC TACTTCAGGG GAATCCAGGG AAGCAAGGCG CTGCTGACGT CGGACCAGAC GCTGGCCGGG  TCGCCTGACA CGTCCAGCCT CGTCCACATG TTCGCCGATA GCCCGGACAT GTTCTTCGAC ACCTTCATCC AGGGCATGAT CAAGATGGGC ACGCTCGACC TCAACCCCAA AGGAAACGTC 
AGGAAGAGCT GCAGGATCAT CAATTAA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTACT ACTCCATGAG CTGCCCCTAC GCGGAGATGA TCGTCCGAGA CGTGGTGGGC GAGGCCATCT ACAAGGACCC AACCCTCGCC GCCAGCCTCA TCCGACTCCA CTTCCACGAC  TGCTTCGTCC GCGGCTGCGA CGCCTCCGTC CTCCTCGATT CCACCCACAA GGCCACCGCC GAGAAGGACG CCCTCACCAA CAAGAGCCTC CGGGGCTTCG AGGTCATCGA CGCCGTCAAG  GCCGCCCTCG AGGACCGCTG CCCCGGCACC GTCTCCTGCG CCGACGTCCT CGCGCTGGCC GCCAGAGACT CCGTCTACAT GGCCGGGGGG CCCTACTACG ACGTGGCCAC GGGGCGGCGC  GACGGCTTCG TCTCCGACGC GGCGGACACC AGCGCGCTGC CCGCAGCCAC ACTCCAGGTG TCGGAGCTCA AGACCGTGTT CGCTTCCCAT GGGTTCACCG TGGCAGAGCT GGTGGCCCTG  TCCGGGGCGC ATACGCTGGG GCAGGCCCAC TGCGCAAACT TCAAGAACCG CGTCAGCGGC AACAAGTTGG ACCCCACGCT GGACGCCCAG ATGGCGGCCA CGTTGGCGAC CACGTGCAAG  AAAGGAGGCG ACGGGGCCAC AGCCAAGCTG GACGCCACCA GCAACGTCTT CGACACGGAC TACTTCAGGG GAATCCAGGG AAGCAAGGCG CTGCTGACGT CGGACCAGAC GCTGGCCGGG  TCGCCTGACA CGTCCAGCCT CGTCCACATG TTCGCCGATA GCCCGGACAT GTTCTTCGAC ACCTTCATCC AGGGCATGAT CAAGATGGGC ACGCTCGACC TCAACCCCAA AGGAAACGTC 
AGGAAGAGCT GCAGGATCAT CAATTAA 

Retrieve as FASTA