Entry information : Ppa1CysPrx03
Entry ID 7962
Creation 2011-02-02 (Christophe Dunand)
Last sequence changes 2011-02-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-02 (Christophe Dunand)
Peroxidase information: Ppa1CysPrx03
Name Ppa1CysPrx03
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue types Protonema
Sporophyte
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ppa1CysPrx03
start..stop
S start..stop
Ppa1CysPrx01 437 3e-159 1..222 1..222
Mp1CysPrx01 408 2e-147 1..221 1..221
Ss1CysPrx02_AU1 353 6e-126 12..221 2..211
Spra1CysPrx02 346 4e-123 1..219 1..219
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 819576..820244 669  
join(819576..820244)


exon

Literature and cross-references Ppa1CysPrx03
DNA ref. Phytozome 11:   scaffold_40 (819576..820244)
Cluster/Prediction ref. UniGene:   Ppa.5177
Protein sequence: Ppa1CysPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   222
PWM (Da):   %s   24017.37  
PI (pH):   %s   6.51
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALKLGDAAP SFVADSTHGK IDFHQYITGS WAILFSHPND FTPVCTTELG AVGKFLPEFE KRGVKVIALS CNDVESHKGW IADIESFTPG AKVSYPILAD PTRELAVKFG MLDPDEIDAK 
GIPLTARAVY VFGPDKKLKL SILYPATTGR NFNEVLRVID SLQLTANYSV ATPVNWNQGD KCMVVPSLSN DAATAKFPKG FETVEVPSGK SYIRLTPQPN VD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 58 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTGA AGCTTGGCGA TGCAGCGCCT TCGTTCGTGG CCGATTCCAC TCACGGCAAG ATCGATTTCC ACCAGTACAT TACTGGTTCG TGGGCAATTC TCTTCTCCCA CCCGAACGAC  TTCACTCCTG TTTGCACTAC CGAGCTCGGA GCCGTCGGGA AGTTTTTGCC GGAGTTTGAG AAGCGGGGGG TTAAGGTGAT CGCGTTATCG TGCAACGATG TGGAGTCGCA CAAGGGTTGG  ATTGCGGACA TTGAGAGCTT CACCCCAGGG GCGAAAGTAA GCTACCCTAT CTTGGCCGAT CCGACGCGGG AGCTCGCTGT GAAGTTTGGG ATGCTGGACC CTGATGAAAT TGATGCCAAG  GGCATTCCGT TGACGGCGAG GGCAGTGTAT GTTTTCGGTC CTGACAAGAA GCTGAAGCTG TCGATCTTGT ACCCTGCCAC CACCGGGCGG AACTTCAATG AGGTTTTGCG TGTGATCGAC  TCGCTTCAGC TCACTGCGAA TTACAGCGTT GCGACTCCTG TGAACTGGAA TCAGGGAGAC AAGTGTATGG TTGTGCCGTC CCTCTCTAAC GATGCCGCTA CGGCGAAGTT CCCGAAGGGT 
TTCGAGACAG TGGAAGTGCC TTCTGGAAAG AGCTACATTC GTCTCACTCC TCAGCCTAAC GTAGATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTGA AGCTTGGCGA TGCAGCGCCT TCGTTCGTGG CCGATTCCAC TCACGGCAAG ATCGATTTCC ACCAGTACAT TACTGGTTCG TGGGCAATTC TCTTCTCCCA CCCGAACGAC  TTCACTCCTG TTTGCACTAC CGAGCTCGGA GCCGTCGGGA AGTTTTTGCC GGAGTTTGAG AAGCGGGGGG TTAAGGTGAT CGCGTTATCG TGCAACGATG TGGAGTCGCA CAAGGGTTGG  ATTGCGGACA TTGAGAGCTT CACCCCAGGG GCGAAAGTAA GCTACCCTAT CTTGGCCGAT CCGACGCGGG AGCTCGCTGT GAAGTTTGGG ATGCTGGACC CTGATGAAAT TGATGCCAAG  GGCATTCCGT TGACGGCGAG GGCAGTGTAT GTTTTCGGTC CTGACAAGAA GCTGAAGCTG TCGATCTTGT ACCCTGCCAC CACCGGGCGG AACTTCAATG AGGTTTTGCG TGTGATCGAC  TCGCTTCAGC TCACTGCGAA TTACAGCGTT GCGACTCCTG TGAACTGGAA TCAGGGAGAC AAGTGTATGG TTGTGCCGTC CCTCTCTAAC GATGCCGCTA CGGCGAAGTT CCCGAAGGGT 
TTCGAGACAG TGGAAGTGCC TTCTGGAAAG AGCTACATTC GTCTCACTCC TCAGCCTAAC GTAGATTGA 

Retrieve as FASTA