Entry information : BdiPrx11 (bradi1g1990)
Entry ID 7989
Creation 2011-02-08 (Toky Ramarohetra)
Last sequence changes 2011-02-08 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-08 (Qiang Li)
Peroxidase information: BdiPrx11 (bradi1g1990)
Name (synonym) BdiPrx11 (bradi1g1990)
Class Class III peroxidase     [Orthogroup: Prx204]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx11
start..stop
S start..stop
SiPrx19 353 5e-122 1..354 1..322
SbPrx64 331 2e-113 12..354 12..323
OsPrx44 321 3e-109 2..354 3..323
BdiPrx123 320 7e-109 32..354 30..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 15997050..15998114 1065  
complement(join(15997050..15998114))


exon

Literature and cross-references BdiPrx11 (bradi1g1990)
DNA ref. Phytozome 12:   Bd1 (15998114..15997050)
Protein sequence: BdiPrx11 (bradi1g1990)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   354
PWM (Da):   %s   36786.48  
PI (pH):   %s   6.36
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAGFKLAIL AVACALLLAT PACHCRPSEL RVGYYEDTCP EAESLVRSAV TDAVTGNDDG IGIGAGLIRL LFHDCFVQGC DASVLLDPTT SNPAPEKLGA PNAHSLRGFE AIDTAKAALE  LACPGVVSCA DVLAFAARDA SYILSVGNYN EPIEFAMPGG RLDGRRSMAE DTLHGSLPSA SANVTELVDA FQTKGLGVED LVVLSGAHSV GQARCSFFSD AGGGVGIDPA FARSVRRRCS 
TPEQAPAPSP AAAAAGENDE ERMMSLDAVT PGALDGQYYR NVVRRRVVLG SDAALMASPE TARIVRASVG RNGRWEKKFG EAMVRMAAIG VKTKLGAAGR RGRGEVRTNC RVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Prediction from ensembl. No prediction from Phytozome. No EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCAG GCTTCAAGCT CGCGATTCTG GCCGTCGCAT GCGCCCTGCT GTTAGCTACT CCCGCATGTC ATTGCCGCCC CTCCGAGCTC CGTGTCGGGT ACTACGAGGA CACGTGCCCG  GAGGCGGAGT CCCTCGTGCG GTCCGCCGTG ACCGACGCCG TCACCGGGAA CGACGACGGC ATCGGCATCG GCGCGGGGCT CATCCGGCTC CTCTTCCACG ACTGCTTCGT GCAAGGCTGC  GACGCCTCCG TGCTCCTCGA CCCGACGACA TCCAACCCGG CTCCGGAGAA GCTCGGCGCC CCGAACGCCC ACAGCCTCCG CGGCTTCGAG GCCATCGACA CCGCCAAAGC CGCCCTCGAG  CTCGCCTGCC CCGGCGTCGT CTCCTGCGCC GACGTTCTCG CCTTCGCCGC CCGCGACGCC TCCTACATCC TGAGCGTCGG GAACTACAAC GAGCCCATCG AGTTCGCGAT GCCGGGAGGA  AGGCTCGACG GCCGCCGGTC CATGGCCGAA GACACGCTGC ACGGATCCCT GCCGTCGGCG TCCGCTAACG TCACGGAACT CGTGGACGCG TTCCAGACAA AGGGGCTCGG CGTTGAGGAC  TTGGTGGTCC TCTCCGGCGC GCACTCGGTG GGCCAGGCCC GATGCTCCTT CTTCTCCGAC GCCGGCGGCG GCGTTGGCAT CGACCCGGCG TTCGCGAGGT CGGTGCGGCG GCGGTGCAGC  ACCCCGGAGC AAGCCCCGGC CCCGTCACCG GCGGCGGCGG CGGCGGGCGA GAACGACGAG GAGAGGATGA TGAGCCTGGA CGCGGTGACC CCGGGGGCGC TGGACGGGCA GTACTACCGG  AACGTGGTGA GGCGGAGGGT GGTGCTGGGC TCCGACGCGG CGCTGATGGC GTCACCGGAG ACGGCGCGGA TTGTGCGCGC GAGCGTCGGG AGGAATGGGA GGTGGGAGAA GAAGTTCGGG 
GAGGCCATGG TGAGGATGGC GGCCATCGGC GTCAAGACTA AGCTGGGCGC CGCCGGGCGC CGTGGGCGCG GCGAGGTCAG GACTAACTGC AGGGTCGTCA ACTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCAG GCTTCAAGCT CGCGATTCTG GCCGTCGCAT GCGCCCTGCT GTTAGCTACT CCCGCATGTC ATTGCCGCCC CTCCGAGCTC CGTGTCGGGT ACTACGAGGA CACGTGCCCG  GAGGCGGAGT CCCTCGTGCG GTCCGCCGTG ACCGACGCCG TCACCGGGAA CGACGACGGC ATCGGCATCG GCGCGGGGCT CATCCGGCTC CTCTTCCACG ACTGCTTCGT GCAAGGCTGC  GACGCCTCCG TGCTCCTCGA CCCGACGACA TCCAACCCGG CTCCGGAGAA GCTCGGCGCC CCGAACGCCC ACAGCCTCCG CGGCTTCGAG GCCATCGACA CCGCCAAAGC CGCCCTCGAG  CTCGCCTGCC CCGGCGTCGT CTCCTGCGCC GACGTTCTCG CCTTCGCCGC CCGCGACGCC TCCTACATCC TGAGCGTCGG GAACTACAAC GAGCCCATCG AGTTCGCGAT GCCGGGAGGA  AGGCTCGACG GCCGCCGGTC CATGGCCGAA GACACGCTGC ACGGATCCCT GCCGTCGGCG TCCGCTAACG TCACGGAACT CGTGGACGCG TTCCAGACAA AGGGGCTCGG CGTTGAGGAC  TTGGTGGTCC TCTCCGGCGC GCACTCGGTG GGCCAGGCCC GATGCTCCTT CTTCTCCGAC GCCGGCGGCG GCGTTGGCAT CGACCCGGCG TTCGCGAGGT CGGTGCGGCG GCGGTGCAGC  ACCCCGGAGC AAGCCCCGGC CCCGTCACCG GCGGCGGCGG CGGCGGGCGA GAACGACGAG GAGAGGATGA TGAGCCTGGA CGCGGTGACC CCGGGGGCGC TGGACGGGCA GTACTACCGG  AACGTGGTGA GGCGGAGGGT GGTGCTGGGC TCCGACGCGG CGCTGATGGC GTCACCGGAG ACGGCGCGGA TTGTGCGCGC GAGCGTCGGG AGGAATGGGA GGTGGGAGAA GAAGTTCGGG 
GAGGCCATGG TGAGGATGGC GGCCATCGGC GTCAAGACTA AGCTGGGCGC CGCCGGGCGC CGTGGGCGCG GCGAGGTCAG GACTAACTGC AGGGTCGTCA ACTAG 

Retrieve as FASTA