Entry information : ZmPrxII0501 (ZmPrxIIE01)
Entry ID 799
Creation 2007-11-12 (Christophe Dunand)
Last sequence changes 2007-11-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-23 (Marie Brette (Scipio))
Peroxidase information: ZmPrxII0501 (ZmPrxIIE01)
Name (synonym) ZmPrxII0501 (ZmPrxIIE01)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Endosperm
Meristems
Ovaries
Pollens
Roots
Sheaths
Shoots
Inducers Cyst nematode infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrxII0501
start..stop
S start..stop
SbPrxII01 386 2e-138 1..233 1..233
OsPrxII0501 306 7e-107 72..233 73..232
ScPrxII05 294 2e-102 13..233 1..211
HaPrxII01 283 9e-98 28..233 5..206
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 98778181..98778882 702  
complement(join(98778181..98778882))


exon

Literature and cross-references ZmPrxII0501 (ZmPrxIIE01)
Literature Hunter,B.G. et al., unpublished
Padegimas,L.S. and Reichert,N.A. Isolation of genes and regulatory sequences implicated in hypersensitive response from Zea mays nematode-resistant line MP307 Unpublished
DNA ref. GenBank:   BZ591946 [5' end]   AC203744.2 (101732..102430)
mRNA ref. GenBank:   AY106451
Cluster/Prediction ref. UniGene:   Zm.9813
Protein sequence: ZmPrxII0501 (ZmPrxIIE01)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   233
PWM (Da):   %s   23632.44  
PI (pH):   %s   8.73
Sequence
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Send to Peroxiscan
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MATSALAALS ATAAAAGKRI LLSRPASSSS LSFASRRLAA GAPLRGFLGA PIRAVASSAS AAPAAAAKTI AVGDRLPDAT LSYFDTSSPD GELKTVTVRD LTAGKKVVLF AVPGAFTPTC 
TQKHLPGFVA KAGELRAKGV DTVACVSVND AFVMRAWKES LGIGDEVLLL SDGNGELARA MGVELDLSDK PVGLGVRSRR YALLAEDGVV KVINLEEGGA FTNSSAEDML NAL 

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Remarks Complete sequence from genomic (Chromo 9, no intron), 2 mRNA and 146 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACCT CCGCCCTCGC TGCTCTGTCC GCCACCGCGG CCGCCGCCGG TAAGCGCATC CTCCTGTCGC GCCCCGCCTC CTCCTCCTCC CTCTCCTTCG CCTCCCGCCG CCTGGCCGCC  GGGGCACCCC TCCGGGGGTT CCTTGGCGCG CCAATCCGGG CCGTGGCGTC GTCGGCGTCG GCGGCCCCCG CGGCGGCGGC CAAGACCATC GCGGTCGGGG ACCGGCTCCC TGACGCGACG  CTCTCCTACT TCGACACGTC CTCCCCCGAC GGCGAGCTGA AGACGGTGAC GGTCCGCGAC CTCACCGCGG GGAAGAAGGT GGTGCTCTTC GCCGTGCCCG GCGCGTTCAC GCCCACCTGC  ACCCAGAAGC ACCTCCCGGG GTTCGTGGCC AAGGCCGGGG AGCTCCGCGC CAAGGGCGTC GACACCGTGG CCTGCGTCTC CGTCAACGAC GCCTTCGTGA TGCGCGCGTG GAAGGAGAGT  CTGGGGATCG GGGACGAGGT GCTGCTCCTG TCGGACGGCA ACGGCGAGCT GGCGCGCGCC ATGGGCGTCG AGCTCGACCT CTCCGACAAG CCCGTGGGGC TCGGCGTCCG GTCCCGCCGC 
TACGCGCTGC TCGCGGAGGA CGGCGTGGTC AAGGTGATCA ACCTCGAGGA GGGCGGCGCG TTCACCAACA GCAGCGCCGA GGACATGCTC AACGCGCTCT GA 

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CDS
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ATGGCTACCT CCGCCCTCGC TGCTCTGTCC GCCACCGCGG CCGCCGCCGG TAAGCGCATC CTCCTGTCGC GCCCCGCCTC CTCCTCCTCC CTCTCCTTCG CCTCCCGCCG CCTGGCCGCC  GGGGCACCCC TCCGGGGGTT CCTTGGCGCG CCAATCCGGG CCGTGGCGTC GTCGGCGTCG GCGGCCCCCG CGGCGGCGGC CAAGACCATC GCGGTCGGGG ACCGGCTCCC TGACGCGACG  CTCTCCTACT TCGACACGTC CTCCCCCGAC GGCGAGCTGA AGACGGTGAC GGTCCGCGAC CTCACCGCGG GGAAGAAGGT GGTGCTCTTC GCCGTGCCCG GCGCGTTCAC GCCCACCTGC  ACCCAGAAGC ACCTCCCGGG GTTCGTGGCC AAGGCCGGGG AGCTCCGCGC CAAGGGCGTC GACACCGTGG CCTGCGTCTC CGTCAACGAC GCCTTCGTGA TGCGCGCGTG GAAGGAGAGT  CTGGGGATCG GGGACGAGGT GCTGCTCCTG TCGGACGGCA ACGGCGAGCT GGCGCGCGCC ATGGGCGTCG AGCTCGACCT CTCCGACAAG CCCGTGGGGC TCGGCGTCCG GTCCCGCCGC 
TACGCGCTGC TCGCGGAGGA CGGCGTGGTC AAGGTGATCA ACCTCGAGGA GGGCGGCGCG TTCACCAACA GCAGCGCCGA GGACATGCTC AACGCGCTCT GA 

Retrieve as FASTA