Entry information : EgrPrx93 (Eucgr.F03025 / Egrandis_v1_0.014915m)
Entry ID 8021
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2011-02-04 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrPrx93 (Eucgr.F03025 / Egrandis_v1_0.014915m)
Name (synonym) EgrPrx93 (Eucgr.F03025 / Egrandis_v1_0.014915m)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx93
start..stop
S start..stop
EglPrx93 820 0 1..399 1..399
EcamPrx93 813 0 1..399 1..399
EguPrx93 749 0 1..399 1..399
VvPrx95 463 5e-164 4..399 10..368
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39812540..39812905 366 N° 2 39813323..39813511 189 N° 3 39813632..39813797 166 N° 4 39813949..39814427 479
join(39812540..39812905,39813323..39813511,39813632..39813797,39813949..39814427 )


exon

Literature and cross-references EgrPrx93 (Eucgr.F03025 / Egrandis_v1_0.014915m)
DNA ref. Phytozome 12:   scaffold_6 (39812540..39814427)
Protein sequence: EgrPrx93 (Eucgr.F03025 / Egrandis_v1_0.014915m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   400 (378)
PWM (Da):   %s   43871.61 (41369.2)  
PI (pH):   %s   4.91 (4.82) Peptide Signal:   %s   cut: 22 range:22-399
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDWIKKLSLLTVLLCIYIALTNPNADTMRKNSPSVLWFPPPSRFTRNLSSRLMSWPQPYDGYLNGVDSATRDSAESLEYDYYRESCPQAEKIIRETVRQIYGVHSGVAPALLRLVFHDCFIKGCDASVLLDSTEVMNAEKDTPPNETLKGFDVIDVIKAEIEEVCPSVVSCADILVLAAREGLLMAGGPFYPLSTGRRDSTHSYADLATYQLPSPYGDLSDTIASFGSRGFDEREIVNLLGAHSIGVIHCKSFQSRLYNFSGTNEPDPSLDVGFLDLMRSKCSKSVSASPSLSPAPSSSQSSFDFSSLTSEEPGEVMNYEGPSSGFGTLYYHRLLQGKGVLYADQQLMVGEETGSWVRAYASDVSLFRRDFAETMMKLSNLQVLTAPNGQVRHSCSKAA*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACTGGATCAAGAAACTGAGCCTCCTCACGGTCTTGCTCTGCATCTACATTGCCCTCACCAACCCGAATGCCGATACCATGAGGAAGAACTCACCCTCGGTTCTCTGGTTCCCGCCT
CCCTCGCGCTTCACTAGGAATCTCTCGTCTCGGTTGATGTCATGGCCTCAACCGTACGACGGCTACCTCAATGGAGTTGACTCGGCGACGCGTGACTCAGCTGAGTCGCTCGAGTACGAT
TACTATCGCGAGTCGTGCCCACAAGCCGAAAAGATCATCCGAGAGACAGTCCGGCAAATCTACGGTGTTCATTCGGGTGTCGCTCCCGCTCTGTTGCGGCTTGTCTTTCACGACTGCTTC
ATCAAG
GTGATTGCCACTCTGATATGTCATTGTCTGCCGAAAGGGGTTAGGGCTTCTAATTTCTTTGTTAATTTGATTATAGTATCTTAGTATGTTCCTGGTCGCGAGTTCTAATTACTG
TGTTTCGAAGAATTCTTTCGTAATGCTATTGTCTATGTTTATGTTGTTGCCCGTATTTGGTGTTTTTGATACTGACTGTGAAGTCAATAGTGGGGTTTTGCTCCATGTTTATATCGCTGT
GTTTCTTTAGCGATTCGGGTATAGTTGCAGCCATTGGAAATTCCACTCCTGTTGGGTGTGTTTTTCATGAATCTTCGTATTGTTTTCCTTTTGATTTTTGGGTCTTTTTCAATTCATTCC
TTTGATCGTAGACGTGACCATCTGACATTTGTAATATCTCCTGCCGAGACGAAACTGACGCAGGGATGCGATGCTTCTGTTTTGTTGGACTCGACCGAAGTGATGAACGCAGAGAAAGAT
ACGCCTCCAAATGAGACACTGAAGGGTTTTGACGTCATCGACGTCATCAAGGCCGAGATCGAAGAGGTCTGCCCCAGTGTCGTATCGTGCGCGGACATTCTTGTTTTGGCGGCCAGAGAA
GGCCTTCTCATG
GTAATTCTCTCCACCAGGATACTGCAACGTGCACATCTCCACAAATGCGATAAAACGTCGTTCAAATTTCTGACGGAATCCAAATTTGAGATTTTTGCGTACTGAGTT
GTGGAATTTCAGGCTGGAGGTCCATTCTATCCCCTGAGCACTGGTAGAAGAGACAGCACGCATTCATACGCAGATCTAGCGACTTATCAGCTTCCTTCACCATATGGAGATCTCTCCGAC
ACAATCGCATCTTTTGGATCAAGAGGATTCGATGAAAGAGAGATTGTCAATCTGCTCG
GTATCTTGCTTATCTTGATTTTTTTGCTCGCGTAATAAATGTTTCCAAGCTTAGTAACTCCT
TATTATGAAGTGGCCAATTTCTGAAACTAGCATTTATGTGGATGCAATCAATGGTTGCACTAGATTAACTCAAATTTGATATGTTTCAGGAGCTCACAGCATCGGAGTTATTCACTGCAA
ATCGTTCCAGAGTCGTCTCTACAATTTTTCCGGGACTAATGAGCCTGACCCATCTCTAGATGTTGGATTCCTCGACCTAATGAGATCCAAATGCAGCAAGAGTGTCTCAGCGTCTCCATC
GCTGTCTCCAGCTCCATCATCATCCCAAAGCTCGTTTGACTTCTCGAGTTTGACATCTGAAGAGCCCGGTGAAGTGATGAACTATGAGGGGCCGAGTTCTGGTTTCGGGACTCTGTACTA
CCATAGGCTGCTGCAAGGTAAAGGGGTTCTCTATGCGGATCAACAGCTCATGGTGGGAGAAGAAACGGGGAGTTGGGTCAGAGCATACGCCTCAGATGTCTCTTTGTTTCGCAGAGATTT
TGCTGAGACCATGATGAAGCTGTCGAACCTCCAAGTCCTAACTGCTCCTAATGGTCAGGTTCGACACAGTTGTTCAAAGGCTGCTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACTGGATCAAGAAACTGAGCCTCCTCACGGTCTTGCTCTGCATCTACATTGCCCTCACCAACCCGAATGCCGATACCATGAGGAAGAACTCACCCTCGGTTCTCTGGTTCCCGCCT
CCCTCGCGCTTCACTAGGAATCTCTCGTCTCGGTTGATGTCATGGCCTCAACCGTACGACGGCTACCTCAATGGAGTTGACTCGGCGACGCGTGACTCAGCTGAGTCGCTCGAGTACGAT
TACTATCGCGAGTCGTGCCCACAAGCCGAAAAGATCATCCGAGAGACAGTCCGGCAAATCTACGGTGTTCATTCGGGTGTCGCTCCCGCTCTGTTGCGGCTTGTCTTTCACGACTGCTTC
ATCAAG
GGATGCGATGCTTCTGTTTTGTTGGACTCGACCGAAGTGATGAACGCAGAGAAAGATACGCCTCCAAATGAGACACTGAAGGGTTTTGACGTCATCGACGTCATCAAGGCCGAG
ATCGAAGAGGTCTGCCCCAGTGTCGTATCGTGCGCGGACATTCTTGTTTTGGCGGCCAGAGAAGGCCTTCTCATG
GCTGGAGGTCCATTCTATCCCCTGAGCACTGGTAGAAGAGACAGC
ACGCATTCATACGCAGATCTAGCGACTTATCAGCTTCCTTCACCATATGGAGATCTCTCCGACACAATCGCATCTTTTGGATCAAGAGGATTCGATGAAAGAGAGATTGTCAATCTGCTC
G
GAGCTCACAGCATCGGAGTTATTCACTGCAAATCGTTCCAGAGTCGTCTCTACAATTTTTCCGGGACTAATGAGCCTGACCCATCTCTAGATGTTGGATTCCTCGACCTAATGAGATCC
AAATGCAGCAAGAGTGTCTCAGCGTCTCCATCGCTGTCTCCAGCTCCATCATCATCCCAAAGCTCGTTTGACTTCTCGAGTTTGACATCTGAAGAGCCCGGTGAAGTGATGAACTATGAG
GGGCCGAGTTCTGGTTTCGGGACTCTGTACTACCATAGGCTGCTGCAAGGTAAAGGGGTTCTCTATGCGGATCAACAGCTCATGGTGGGAGAAGAAACGGGGAGTTGGGTCAGAGCATAC
GCCTCAGATGTCTCTTTGTTTCGCAGAGATTTTGCTGAGACCATGATGAAGCTGTCGAACCTCCAAGTCCTAACTGCTCCTAATGGTCAGGTTCGACACAGTTGTTCAAAGGCTGCTTGA

Retrieve as FASTA