Entry information : EgrPrx[P]174
Entry ID 8045
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-28 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EgrPrx[P]174
Name EgrPrx[P]174
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]174
start..stop
S start..stop
EguPrx[P]174 557 0 1..281 1..281
EglPrx[P]174 492 6e-179 1..281 1..259
EgrPrx154 344 1e-119 1..281 18..315
EguPrx153 343 2e-119 1..281 18..315
Literature and cross-references EgrPrx[P]174
DNA ref. Phytozome 12:   scaffold_11 (44860011..44858971)
Protein sequence: EgrPrx[P]174
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   280
PWM (Da):   %s   30030  
PI (pH):   %s   6.42
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GFYKSTCPQV EMIVRNAVHK AVSSNPGIEA GLIRLLFHDC FVRGRDASLL LNSSPGNKAE RDHPVSRSL* GFxVIDEAKA RLEAAxPKTV SCVDILAFAT RESAYQLGGI SYAVPAGHHD  SLVFREDNML QNLPPPSFNA KPLVDIFASK GLSTDEMVTL SGVHSIGVSR CSVFSERLYA VDNATDAHDP PLDANDPLVA LDSTPTRLDN KYFQDLQNHR GILISDQTLY SSSAMADMVA 
DNAHDNRACS LKFPKAMVRM GSIEVLTGSQ GEVRRQCSSV N 

Retrieve as FASTA  
Remarks Pseudogene from genomic (frame shift and stop codon in exon 1, PS is missing or extra 5' intron). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGTTCTACA AATCGACGTG TCCACAAGTG GAGATGATTG TGAGGAATGC TGTGCATAAG GCTGTCTCCA GCAACCCCGG CATTGAAGCC GGTCTCATTA GGTTGCTGTT CCATGATTGT  TTTGTCAGGG TAATGTGATA GATAATCCCT TAATGTCAAG CCAAGTATAT ACGCGCATGT GCATGGAAAA ACATTGCTTA GACTCAGTTC TATCCATGAG CGTCACGGTG CTGGAGACTG  ATAAATAGTA ACCAAGTTAA ACTGTGATCG CAGGGCCGTG ATGCTTCTCT GCTCCTAAAT TCCAGCCCAG GAAATAAGGC GGAACGAGAC CATCCTGTTA GCCGCAGCTT ATGAGGATTC  GAnGTAATTG ATGAAGCAAA AGCCCGGTTG GAAGCCGCGT CnCCCAAAAC AGTATCATGT GTGGACATCC TCGCCTTTGC CACTCGCGAA AGCGCATACC AGCTAGGAGG AATTAGCTAC  GCAGTCCCCG CTGGCCACCA CGACAGCCTC GTCTTTCGCG AAGACAACAT GTTACAGAAC CTGCCGCCCC CTTCCTTCAA TGCCAAGCCG CTGGTGGACA TTTTCGCTAG CAAAGGGCTG  TCTACGGACG AGATGGTGAC GCTCTCAGGA GTGCACTCGA TTGGCGTCTC GCGTTGCTCC GTCTTCTCAG AGCGCCTCTA CGCTGTTGAC AACGCAACCG ATGCCCATGA TCCACCATTG  GATGCCAAGT ACATGTCTTT CCTCGGGACC ATTTGCCCGA GGCCACAGAG CAGAAACAGC GCAGCGATCC ACTGGTGGCA CTAGACTCAA CGCCGACTCG CTTGGACAAC AAGTATTTTC  AGGATCTGCA GAATCACCGT GGCATATTGA TTTCGGACCA GACCTTGTAC TCGAGCTCTG CAATGGCCGA CATGGTCGCC GACAATGCTC ACGACAATAG AGCCTGCAGT CTCAAGTTCC 
CAAAGGCCAT GGTGCGGATG GGCTCCATTG AGGTCCTCAC AGGCTCACAA GGTGAGGTTA GAAGACAGTG CAGCTCCGTG AAT 

Retrieve as FASTA