Entry information : EgrPrx161 (Eucgr.K00806 / Egrandis_v1_0.026297m)
Entry ID 8046
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-16 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-06-07 (Qiang Li)
Peroxidase information: EgrPrx161 (Eucgr.K00806 / Egrandis_v1_0.026297m)
Name (synonym) EgrPrx161 (Eucgr.K00806 / Egrandis_v1_0.026297m)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx161
start..stop
S start..stop
EglPrx161 637 0 1..327 1..327
EcamPrx163 635 0 1..327 1..326
EgrPrx163 629 0 1..327 1..326
EguPrx163 625 0 1..327 1..326
Literature and cross-references EgrPrx161 (Eucgr.K00806 / Egrandis_v1_0.026297m)
DNA ref. Phytozome 12:   scaffold_11 (9209692..9211674)
Protein sequence: EgrPrx161 (Eucgr.K00806 / Egrandis_v1_0.026297m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (301)
PWM (Da):   %s   34891.76 (32138.2) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.88 (8.88) Peptide Signal:   %s   cut: 27 range:27-327
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAQKLLSLL VFQLALVAFI LDVANAQGLK IGFYKNTCPQ AEEIVKKAAA SFISRAPSLA APLLRMHFHD CFVRGCDGSV LLNSTSSNQA VSKPVTELSL RGYQVIDAAK DALExKKCPG  VVSCADILAL VARDAVSMMN GPFWQVPTGR RDGRVSNLQD ALNNLPGPAF SISALKSSFA AKGLSVKDLA VLSGGHTLGM SHCSSFTNRL YNFTGKNDAD PSMDPNYVAQ LKTKCKPNDA 
TTIVEMDPGS AKKFDMDYYT LVSKRRGLFQ SDAALLTDST TNAYVQLQLT NKSTFAEDFG VSMVNMGNIG VLTGNSGEIR KKCYLVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction (exon 1 and start of exon 2 are missing; Frame shift in exon 2 (extra a in "t gaa aaa aaa atg")), An X in protein due to N in DNA because of bad sequencing. No EST. join(9209692..9209913,9210359..9210548)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGCTC AGAAGCTTCT CTCTCTCCTG GTTTTCCAGC TCGCGCTCGT CGCTTTTATT CTCGACGTCG CCAATGCTCA AGGCCTCAAA ATAGGGTTCT ACAAGAATAC GTGCCCTCAG  GCTGAGGAGA TAGTTAAGAA AGCGGCGGCG AGCTTCATTT CTCGAGCCCC CTCTCTTGCC GCTCCTCTCT TGAGGATGCA TTTCCATGAC TGCTTCGTCA GGGTACTTCT ATTTTAGCGG  TTAAATCGAC TCGAGTGACC CCGTTGTCAT CAATTTCTTA ATTATTGCAT GTGGTTTCTT TGAATCAAAC ATATGCACAT CACTCCCCAC ATCATTAATT TGTTGCGAAA TAAGTTGTAG  CTATAATTAG TTGATGTGTA GAGATCTATC TTAATTAGAT AACCTGTTTT ATGTTAGTAT ACACATTTGC GTTCCTTAAA ACTATCCGTC TCTGGATAAT CAAACTTGAT TTTGGAGGAC  ACCTATGTTG TACGCAGTCA AATGTCTCGT TTTCCTGATT CGAAACTTTA TGTCATGAAA TGAGACAAAT TTACCATAAT TTACAAATTC ATGCAGAGGC AAGCACCTTT ACTAAGTTCT  AAAGTTCATC GTTTTTTTTT TTTTTTTTTT GCCTTCCTTT CCCTCTCTTT TTTGGGTTTA TTTACAGGGA TGTGATGGCT CTGTGCTACT GAATTCAACA TCTTCTAACC AAGCAGTTTC  CAAACCTGTC ACTGAGCTGT CACTGAGAGG ATACCAAGTC ATCGACGCAG CCAAAGATGC CCTTGAAAnn AAAAAATGTC CTGGTGTTGT GTCTTGTGCT GATATTCTTG CTCTAGTTGC  TCGTGATGCA GTTTCCATGG TAATTGATTA ATTAAAGATT CGATTCCTGT TGTATTCTAG CTAGGGATTT CTATAATGCT GGTCATCAAC GAAAATTGTT TCATAAATTC TATTTTTGTG  ATAAATCAAC ATTTTTTTTT TTATCAATGA TTTCAAATGG AATTGATTAT CGAATTTTAT TTCTGATGAG TGTGTCGATA GCGCAAACTG ATCAGAGTGC AAGTCATTTG CACAGGTTAA  AAACTTGGAC TCAACTAGTT CATGTGGTTT GCAAAGTGCT ACATGGGTCT TTGCGTCCAC GCCCCTAAAT AACAAGTGAT GTCAATTTAT GAAATGTGAC ATGATTTTTC TAAATCGTTG  GTTGGATAAC ACAGCTAATG GATATGGAAT TTCCAGTTTT TACTATGAAG GTATAGAGTA AGAATATCGA ATATCTTTAA CTTGTAATTG GATTCTGGTT TCAGATGAAC GGTCCATTTT  GGCAAGTCCC CACAGGAAGG AGGGATGGCA GAGTGTCTAA CCTCCAAGAT GCCTTGAACA ACTTGCCCGG TCCTGCTTTC AGCATTTCTG CGCTTAAATC GTCCTTTGCC GCGAAGGGTC  TCAGCGTCAA AGACCTTGCC GTTCTCTCAG GTACGAGACC AATCATAGTA CATATACCTA ACATTATTGA AAGTCCTAAT TATTAGTTCA TAATTTAAGT ACAGTGAAAT TAACGGTGTG  GTTGCATCGA TGATAATTCA GGGGGACACA CCCTCGGAAT GTCGCACTGT TCCTCCTTCA CGAACCGTCT GTACAACTTC ACCGGCAAGA ACGACGCCGA CCCATCCATG GACCCCAACT  ATGTCGCTCA GCTCAAGACC AAGTGCAAGC CGAACGACGC CACCACCATC GTCGAGATGG ACCCGGGGAG CGCCAAGAAG TTTGACATGG ACTACTACAC CCTCGTCTCC AAGAGGAGAG  GCCTCTTCCA GTCCGATGCC GCGCTGCTCA CCGACAGCAC CACCAACGCC TACGTGCAGC TCCAGCTGAC GAACAAATCG ACATTTGCCG AAGACTTTGG CGTGTCCATG GTGAACATGG 
GCAACATCGG CGTTCTCACG GGCAATTCGG GCGAGATTAG GAAGAAATGC TATTTGGTTA ACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGCTC AGAAGCTTCT CTCTCTCCTG GTTTTCCAGC TCGCGCTCGT CGCTTTTATT CTCGACGTCG CCAATGCTCA AGGCCTCAAA ATAGGGTTCT ACAAGAATAC GTGCCCTCAG  GCTGAGGAGA TAGTTAAGAA AGCGGCGGCG AGCTTCATTT CTCGAGCCCC CTCTCTTGCC GCTCCTCTCT TGAGGATGCA TTTCCATGAC TGCTTCGTCA GGGGATGTGA TGGCTCTGTG  CTACTGAATT CAACATCTTC TAACCAAGCA GTTTCCAAAC CTGTCACTGA GCTGTCACTG AGAGGATACC AAGTCATCGA CGCAGCCAAA GATGCCCTTG AAAnnAAAAA ATGTCCTGGT  GTTGTGTCTT GTGCTGATAT TCTTGCTCTA GTTGCTCGTG ATGCAGTTTC CATGATGAAC GGTCCATTTT GGCAAGTCCC CACAGGAAGG AGGGATGGCA GAGTGTCTAA CCTCCAAGAT  GCCTTGAACA ACTTGCCCGG TCCTGCTTTC AGCATTTCTG CGCTTAAATC GTCCTTTGCC GCGAAGGGTC TCAGCGTCAA AGACCTTGCC GTTCTCTCAG GGGGACACAC CCTCGGAATG  TCGCACTGTT CCTCCTTCAC GAACCGTCTG TACAACTTCA CCGGCAAGAA CGACGCCGAC CCATCCATGG ACCCCAACTA TGTCGCTCAG CTCAAGACCA AGTGCAAGCC GAACGACGCC  ACCACCATCG TCGAGATGGA CCCGGGGAGC GCCAAGAAGT TTGACATGGA CTACTACACC CTCGTCTCCA AGAGGAGAGG CCTCTTCCAG TCCGATGCCG CGCTGCTCAC CGACAGCACC  ACCAACGCCT ACGTGCAGCT CCAGCTGACG AACAAATCGA CATTTGCCGA AGACTTTGGC GTGTCCATGG TGAACATGGG CAACATCGGC GTTCTCACGG GCAATTCGGG CGAGATTAGG 
AAGAAATGCT ATTTGGTTAA CTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGCTC AGAAGCTTCT CTCTCTCCTG GTTTTCCAGC TCGCGCTCGT CGCTTTTATT CTCGACGTCG CCAATGCTCA AGGCCTCAAA ATAGGGTTCT ACAAGAATAC GTGCCCTCAG  GCTGAGGAGA TAGTTAAGAA AGCGGCGGCG AGCTTCATTT CTCGAGCCCC CTCTCTTGCC GCTCCTCTCT TGAGGATGCA TTTCCATGAC TGCTTCGTCA GGGGATGTGA TGGCTCTGTG  CTACTGAATT CAACATCTTC TAACCAAGCA GTTTCCAAAC CTGTCACTGA GCTGTCACTG AGAGGATACC AAGTCATCGA CGCAGCCAAA GATGCCCTTG AAAnnAAAAA ATGTCCTGGT  GTTGTGTCTT GTGCTGATAT TCTTGCTCTA GTTGCTCGTG ATGCAGTTTC CATGATGAAC GGTCCATTTT GGCAAGTCCC CACAGGAAGG AGGGATGGCA GAGTGTCTAA CCTCCAAGAT  GCCTTGAACA ACTTGCCCGG TCCTGCTTTC AGCATTTCTG CGCTTAAATC GTCCTTTGCC GCGAAGGGTC TCAGCGTCAA AGACCTTGCC GTTCTCTCAG GGGGACACAC CCTCGGAATG  TCGCACTGTT CCTCCTTCAC GAACCGTCTG TACAACTTCA CCGGCAAGAA CGACGCCGAC CCATCCATGG ACCCCAACTA TGTCGCTCAG CTCAAGACCA AGTGCAAGCC GAACGACGCC  ACCACCATCG TCGAGATGGA CCCGGGGAGC GCCAAGAAGT TTGACATGGA CTACTACACC CTCGTCTCCA AGAGGAGAGG CCTCTTCCAG TCCGATGCCG CGCTGCTCAC CGACAGCACC  ACCAACGCCT ACGTGCAGCT CCAGCTGACG AACAAATCGA CATTTGCCGA AGACTTTGGC GTGTCCATGG TGAACATGGG CAACATCGGC GTTCTCACGG GCAATTCGGG CGAGATTAGG 
AAGAAATGCT ATTTGGTTAA CTAA 

Retrieve as FASTA