Entry information : EgrPrx[P]107
Entry ID 8052
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EgrPrx[P]107
Name EgrPrx[P]107
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]107
start..stop
S start..stop
EguPrx[P]107 343 2e-123 1..169 1..169
EglPrx[P]107 341 9e-123 1..169 1..169
EgrPrx[P]111 263 7e-92 1..168 1..163
EcamPrx[P]108 261 1e-91 43..169 1..127
Literature and cross-references EgrPrx[P]107
DNA ref. Phytozome 11:   scaffold_7 (40534706..40534200)
Protein sequence: EgrPrx[P]107
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   168
PWM (Da):   %s   18740.6  
PI (pH):   %s   10.03
Sequence
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Send to Peroxiscan
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MFGGRR*GQR SPGRGRGRGS LACRKHLQNK TRSEGLDFEA IANSLNKWIV IFVLFVSFLV SLRNRKGSSA DQHGRPFALY FSLDSLSPVL LQRNDDGVID REDPALGLQD DFYRHTCPAT 
KEIVRSSMSR VYSQRPEVAP ALLRLLFHDC FIRGCDASVL MDGSHGNRS 

Retrieve as FASTA  
Remarks Pseudogene from genomic (exon 1 with stop and the start part of the exon 2). No prediction from Phytozome. No EST.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTCGGTG GACGTCGGTG AGGACAGCGT TCACCTGGGC GAGGGCGAGG GCGAGGGTCC CTCGCTTGCA GAAAACATCT CCAAAATAAA ACAAGATCAG AAGGTTTGGA CTTTGAAGCC  ATTGCCAACT CCCTGAACAA GTGGATCGTC ATCTTCGTTC TCTTCGTCTC CTTCCTCGTC TCGCTCAGGA ATCGCAAGGG CTCAAGTGCA GATCAGCATG GACGGCCCTT CGCCCTCTAT  TTTTCTCTGG ATTCCCTCTC GCCCGTCCTG CTTCAGAGGA ACGATGATGG GGTCATCGAC CGAGAAGACC CCGCGCTCGG GCTCCAGGAC GACTTCTACC GCCACACGTG CCCTGCTACT  AAAGAAATCG TGAGGTCATC CATGTCCAGA GTCTACTCCC AACGCCCCGA AGTTGCCCCT GCGCTTCTCC GTCTCCTCTT CCACGATTGC TTCATCAGGG GTTGCGATGC TTCAGTTCTC 
ATGGACGGTA GCCATGGAAA CCGAAGC 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTCGGTG GACGTCGGTG AGGACAGCGT TCACCTGGGC GAGGGCGAGG GCGAGGGTCC CTCGCTTGCA GAAAACATCT CCAAAATAAA ACAAGATCAG AAGGTTTGGA CTTTGAAGCC  ATTGCCAACT CCCTGAACAA GTGGATCGTC ATCTTCGTTC TCTTCGTCTC CTTCCTCGTC TCGCTCAGGA ATCGCAAGGG CTCAAGTGCA GATCAGCATG GACGGCCCTT CGCCCTCTAT  TTTTCTCTGG ATTCCCTCTC GCCCGTCCTG CTTCAGAGGA ACGATGATGG GGTCATCGAC CGAGAAGACC CCGCGCTCGG GCTCCAGGAC GACTTCTACC GCCACACGTG CCCTGCTACT  AAAGAAATCG TGAGGTCATC CATGTCCAGA GTCTACTCCC AACGCCCCGA AGTTGCCCCT GCGCTTCTCC GTCTCCTCTT CCACGATTGC TTCATCAGGG GTTGCGATGC TTCAGTTCTC 
ATGGACGGTA GCCATGGAAA CCGAAGC 

Retrieve as FASTA