Entry information : EgrPrx[P]101
Entry ID 8053
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EgrPrx[P]101
Name EgrPrx[P]101
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]101
start..stop
S start..stop
EguPrx[P]101 157 1e-52 1..76 1..76
EcamPrx[P]108 142 3e-46 3..75 55..127
EgrPrx[P]108 141 4e-46 3..76 5..78
EguPrx[P]107 142 1e-45 3..75 97..169
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 24467876..24468103 228  
join(24467876..24468103)


exon

Literature and cross-references EgrPrx[P]101
DNA ref. Phytozome 12:   scaffold_7 (24467876..24468103)
Protein sequence: EgrPrx[P]101
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   76
PWM (Da):   %s   8327.03  
PI (pH):   %s   8.08
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MMGSSTEKSP ALGLQDDFYR HTCPATKEIV RSSMSRVYSQ RPEVAPALLR LLFHDCFIRG CDASVLMDGS HGNRSP 

Retrieve as FASTA  
Remarks Pseudogene from genomic (part of exons 1 and 2). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGGGGT CATCGACCGA GAAGAGCCCC GCGCTCGGGC TCCAGGACGA CTTCTACCGC CACACGTGCC CTGCTACTAA AGAAATCGTG AGGTCATCCA TGTCCAGAGT CTACTCCCAA 
CGCCCCGAAG TTGCCCCCGC GCTTCTCCGT CTCCTCTTCC ACGATTGCTT CATCAGGGGT TGCGATGCTT CAGTTCTCAT GGACGGTAGC CATGGAAACC GAAGCCCC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGGGGT CATCGACCGA GAAGAGCCCC GCGCTCGGGC TCCAGGACGA CTTCTACCGC CACACGTGCC CTGCTACTAA AGAAATCGTG AGGTCATCCA TGTCCAGAGT CTACTCCCAA 
CGCCCCGAAG TTGCCCCCGC GCTTCTCCGT CTCCTCTTCC ACGATTGCTT CATCAGGGGT TGCGATGCTT CAGTTCTCAT GGACGGTAGC CATGGAAACC GAAGCCCC 

Retrieve as FASTA