Entry information : EgrPrx102 (Eucgr.G01637 / Egrandis_v1_0.045133m)
Entry ID 8056
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2011-02-08 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrPrx102 (Eucgr.G01637 / Egrandis_v1_0.045133m)
Name (synonym) EgrPrx102 (Eucgr.G01637 / Egrandis_v1_0.045133m)
Class Class III peroxidase    [Orthogroup: Prx036]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx102
start..stop
S start..stop
EglPrx102 655 0 1..323 1..323
EguPrx102 647 0 1..323 1..323
EgrPrx56 597 0 1..323 1..323
EglPrx56 597 0 1..323 1..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29544809..29545027 219 N° 2 29544529..29544717 189 N° 3 29543455..29544018 564  
complement(join(29543455..29544018,29544529..29544717,29544809..29545027))


exon

Literature and cross-references EgrPrx102 (Eucgr.G01637 / Egrandis_v1_0.045133m)
DNA ref. Phytozome 12:   scaffold_7 (29545027..29543455)
Protein sequence: EgrPrx102 (Eucgr.G01637 / Egrandis_v1_0.045133m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (297)
PWM (Da):   %s   35567.07 (32825.6)  
PI (pH):   %s   8.98 (8.90) Peptide Signal:   %s   cut: 27 range:27-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVLAPKPCSCVMIALLLAMVSVSKAVLDAHYYDRTCPQAEKIILQTVQNATRHDPKVPARLLRMFFHDCFIRGCDASLLLDSTPGNKAEKDGPPNISVRAFYVIDDAKARLETACPHTVSCADIVAVAARDVVTMAGGPYWNVPKGRKDGRVSNASETVNLPAPTFNVTQLLQSFAKRGLGLKDLVALSGGHTLGFSHCSSFEARLRNFSLIHDVDPTLNRAFAQQLKNKCPKPNRDRNAGQFLDATSLTFDNVYYRRLVAGEGVFGSDQALYSDYRTRWMVDSFAKDQSLFFREFAASMVRLGNVGVLHNGEVRVNCRTVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGTTCTTGCGCCGAAGCCTTGCTCTTGCGTGATGATCGCCCTTCTACTGGCGATGGTTTCAGTATCGAAAGCGGTACTTGATGCCCATTACTATGACCGGACATGTCCGCAAGCT
GAGAAAATCATATTGCAGACGGTCCAAAATGCCACGAGGCACGACCCCAAAGTCCCCGCTCGCCTCCTTAGGATGTTCTTCCATGACTGTTTCATTCGG
GTATGGACATCTGCAAACTTA
TCTGCAAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGCGTGTCGTTGGATGGTGCATGCACACAGGGATGCGATGCATCGTTGTTGCTCGACTCTACTCCTGGAAACAAAGCAGA
GAAAGATGGTCCTCCTAATATCTCAGTTCGAGCATTCTATGTGATCGATGATGCCAAAGCAAGGCTTGAAACGGCATGTCCACATACAGTCTCTTGTGCTGATATCGTCGCCGTTGCAGC
TAGAGATGTAGTCACCATG
GTAATAACCAAAACTCCCCAAGCGAGCCAATTCTACCTCATGATGCGCATTGTGTGCATGATCGTTTCTTTATAATTCTCGTAATTATTCTGAGCTTTATG
CCGAATCTAACAAAAAGGAAGCTCGCTTGATATCTTCCATGTTCATTAACTTAGTTCTACCATGTTGGCATAAGATTCACTCAAGAAACTTCGAACTCTTTACTGATAATTATGGTAACG
AGTGAGTGAAGTAAACTCAACCATCATTTCGGAAAAAGCCTAGACTAACATAGTTTTAGAAAGTGTTTATGAAATTGTACCAGCGAGCCCGAGAGAAAAAGGAAAAGAATATCGAATAGC
TTCCCACCTTATTACTGTATTTTGTGGTCATGTAGTTATCACTTGATTCGCTTGAAAAGTGACTCTCCATAAAATAAAAATTAATAAGTTGCTCCACACATTGAAAGAATTACTAATGCC
TCGAGATAGCTATTGTGGCATAATATTGTCTATTTCTTTCATTGTTAAGGCTGGAGGGCCATATTGGAACGTGCCAAAAGGCAGAAAAGATGGAAGAGTATCAAATGCTTCAGAAACGGT
CAACTTGCCAGCACCAACATTCAACGTGACCCAACTCCTTCAAAGCTTTGCCAAAAGAGGCTTAGGCCTCAAGGACTTGGTTGCACTCTCTGGTGGTCACACTCTTGGCTTCTCTCACTG
TTCCTCTTTTGAAGCCCGGCTTCGTAACTTCAGTCTGATTCATGATGTTGATCCGACCTTGAACCGTGCATTTGCACAACAGCTGAAGAATAAATGCCCTAAGCCAAACAGGGATCGAAA
TGCAGGACAGTTTCTGGATGCCACATCGCTAACCTTCGACAACGTTTACTACAGAAGACTTGTGGCGGGTGAAGGTGTGTTTGGGTCAGATCAAGCACTGTACAGTGATTACAGGACAAG
GTGGATGGTCGATTCGTTTGCCAAAGATCAAAGTCTGTTTTTCAGGGAGTTTGCTGCTTCTATGGTAAGACTTGGGAATGTTGGAGTGCTACATAATGGAGAAGTGAGAGTAAACTGCAG
AACGGTAAACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGTTCTTGCGCCGAAGCCTTGCTCTTGCGTGATGATCGCCCTTCTACTGGCGATGGTTTCAGTATCGAAAGCGGTACTTGATGCCCATTACTATGACCGGACATGTCCGCAAGCT
GAGAAAATCATATTGCAGACGGTCCAAAATGCCACGAGGCACGACCCCAAAGTCCCCGCTCGCCTCCTTAGGATGTTCTTCCATGACTGTTTCATTCGG
GGATGCGATGCATCGTTGTTG
CTCGACTCTACTCCTGGAAACAAAGCAGAGAAAGATGGTCCTCCTAATATCTCAGTTCGAGCATTCTATGTGATCGATGATGCCAAAGCAAGGCTTGAAACGGCATGTCCACATACAGTC
TCTTGTGCTGATATCGTCGCCGTTGCAGCTAGAGATGTAGTCACCATG
GCTGGAGGGCCATATTGGAACGTGCCAAAAGGCAGAAAAGATGGAAGAGTATCAAATGCTTCAGAAACGGTC
AACTTGCCAGCACCAACATTCAACGTGACCCAACTCCTTCAAAGCTTTGCCAAAAGAGGCTTAGGCCTCAAGGACTTGGTTGCACTCTCTGGTGGTCACACTCTTGGCTTCTCTCACTGT
TCCTCTTTTGAAGCCCGGCTTCGTAACTTCAGTCTGATTCATGATGTTGATCCGACCTTGAACCGTGCATTTGCACAACAGCTGAAGAATAAATGCCCTAAGCCAAACAGGGATCGAAAT
GCAGGACAGTTTCTGGATGCCACATCGCTAACCTTCGACAACGTTTACTACAGAAGACTTGTGGCGGGTGAAGGTGTGTTTGGGTCAGATCAAGCACTGTACAGTGATTACAGGACAAGG
TGGATGGTCGATTCGTTTGCCAAAGATCAAAGTCTGTTTTTCAGGGAGTTTGCTGCTTCTATGGTAAGACTTGGGAATGTTGGAGTGCTACATAATGGAGAAGTGAGAGTAAACTGCAGA
ACGGTAAACTGA

Retrieve as FASTA