Entry information : EgrPrx[P]111
Entry ID 8057
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-13 (Christophe Dunand)
Peroxidase information: EgrPrx[P]111
Name EgrPrx[P]111
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]111
start..stop
S start..stop
EguPrx[P]111 335 2e-120 1..165 1..165
EcamPrx[P]111 335 2e-120 1..165 1..165
EglPrx[P]111 333 1e-119 1..165 1..165
EguPrx[P]107 246 3e-85 19..163 21..168
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 43000614..43001108 495  
join(43000614..43001108)


exon

Literature and cross-references EgrPrx[P]111
DNA ref. Phytozome 12:   scaffold_7 (43000614..43001108)
Protein sequence: EgrPrx[P]111
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165
PWM (Da):   %s   18287.34 Transmb domain:   %s   o35-57i
PI (pH):   %s   9.77
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFAGGCRGQP SPGRGRGSLA CRTSPKKTRV GRLEAIANSL NKWIVIFVLF ISFLVSLRNH KGSSANQHGR RFTLHFSLDS LSPVFLQRND DGVIDREDPA LGLQYDFYRH TCPATEEIAR 
SSMSRVYSQH PEVAPALLRL LFHDCFIRGC DASVLLDGSH GNRRP 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGCTG GGGGTTGCCG AGGACAGCCT TCACCCGGGC GAGGGCGAGG GTCCCTCGCT TGCAGAACAT CTCCAAAGAA AACCAGGGTC GGAAGGTTAG AAGCCATTGC CAACTCCCTG  AACAAGTGGA TCGTCATCTT CGTTCTCTTC ATCTCCTTCC TCGTCTCGCT CAGGAATCAC AAGGGCTCAA GCGCAAATCA GCACGGACGG CGCTTCACCC TCCATTTTTC TCTGGATTCC  CTCTCCCCCG TCTTCCTTCA GAGGAACGAT GATGGCGTCA TCGACCGAGA AGACCCCGCG CTCGGGCTCC AGTACGACTT CTACCGCCAC ACGTGCCCTG CTACCGAAGA AATCGCGAGG  TCATCCATGT CCAGAGTCTA CTCCCAACAC CCCGAAGTTG CCCCTGCGCT TCTCCGTCTC CTCTTCCACG ATTGCTTCAT CAGGGGTTGC GATGCTTCAG TTCTCCTGGA CGGTAGCCAT 
GGAAACCGAA GGCCC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGCTG GGGGTTGCCG AGGACAGCCT TCACCCGGGC GAGGGCGAGG GTCCCTCGCT TGCAGAACAT CTCCAAAGAA AACCAGGGTC GGAAGGTTAG AAGCCATTGC CAACTCCCTG  AACAAGTGGA TCGTCATCTT CGTTCTCTTC ATCTCCTTCC TCGTCTCGCT CAGGAATCAC AAGGGCTCAA GCGCAAATCA GCACGGACGG CGCTTCACCC TCCATTTTTC TCTGGATTCC  CTCTCCCCCG TCTTCCTTCA GAGGAACGAT GATGGCGTCA TCGACCGAGA AGACCCCGCG CTCGGGCTCC AGTACGACTT CTACCGCCAC ACGTGCCCTG CTACCGAAGA AATCGCGAGG  TCATCCATGT CCAGAGTCTA CTCCCAACAC CCCGAAGTTG CCCCTGCGCT TCTCCGTCTC CTCTTCCACG ATTGCTTCAT CAGGGGTTGC GATGCTTCAG TTCTCCTGGA CGGTAGCCAT 
GGAAACCGAA GGCCC 

Retrieve as FASTA