Entry information : EgrPrx58(Eucgr.B01255 / Egrandis_v1_0.039927m)
Entry ID 8062
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-28 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2020-02-13 (Christophe Dunand)
Peroxidase information: EgrPrx58(Eucgr.B01255 / Egrandis_v1_0.039927m)
Name EgrPrx58(Eucgr.B01255 / Egrandis_v1_0.039927m)
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx58
start..stop
S start..stop
EcamPrx58 423 9e-152 1..223 106..328
EcamPrx176 404 2e-144 1..223 106..325
EgrPrx176 356 8e-126 1..199 94..289
EglPrx176 344 2e-121 1..199 74..269
Literature and cross-references EgrPrx58(Eucgr.B01255 / Egrandis_v1_0.039927m)
DNA ref. Phytozome 11:   scaffold_2 (20375016..20373025)
EST ref. GenBank:   HO764598 [Fragment]
Protein sequence: EgrPrx58(Eucgr.B01255 / Egrandis_v1_0.039927m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   223
PWM (Da):   %s   24413.53  
PI (pH):   %s   9.68
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
KIKEKLEETC PGVVSCADIL ALAARDSVSF QFKKSLWEVL TGRRDGRISR ESEALSNIPR PVFNFTSLKQ SFANKGLTLH DLVVLSGGHT IGVGHCNSFS KRLYNFIGKG GKGDQDPSLN 
PTYASQLKAR CKTLSDTTTI VAMDPGSPLS FDNHYYTALN QNQGLFQSDA ALLTNKESSK IVNKLLDQDR FFTEFGQSMK RMGTVQVLTG SNGEIRKKCN VIN 

Retrieve as FASTA  
Remarks Partial sequence from genomic (exon 1 and start of exon 2 are missing). Incorrect prediction from Phytozome (Contains only exons 3 and 4). N in the upstream sequence. 1 EST. complement(join(20373025..20373437,20374851..20375016)).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTCAAGAAGT CACTGTGGGA GGTGTTGACT GGAAGAAGAG ACGGGAGAAT CTCACGTGAA TCGGAGGCGC TTTCCAATAT CCCTCGACCA GTCTTCAACT TCACGTCTCT CAAGCAATCT  TTTGCCAACA AGGGCCTCAC TCTTCATGAC CTTGTTGTCT TATCAGGTAA ATTAAAGACA AAAAAAAATC ACATTTTATA TGGTAAAAAA TTAGCCAAGT GCTCCTGGGT AGGTTGTCCT  AATGTCTAGC GAGTCAATTT TCCTTTTCAG GTCATTTATT TCTGCGTGTG TGAATATTTT CGTAAGAATG CAAATGCATT GTACCGGATT ATCTTTGAAA AATATTTGAT GAAATACCCT  TTTCTCGTTT CTGAAAAGGG AAACCGATTG ATCAATGTGA TGGGTAAAAT GGCCCCACAC AGTGAATTTA TGCACTTTCA AGCGAATCTC ATTTCCCAGA ACAAGAAATG TTGCAAATTG  GACCCCACTT TCAATTTTCT ACGGGATGGG CAACCAGAAC ACAATATCCG TGGACAAGCA TTAGATTCGA AATTTCATAT TTATGTAAAT TCTATATAGT TTTTGGTCTT CCAATGAGAG  AAACATAACT CGATGATATT ATTTAAGCAA AAAAAAAAAA AAAACTCCAT GGAAAGTTCC ATAGCAGTTT TAGGTGGACA TTGCAAAAAA AAAAAAAAAA TGATAATATC TACGAATTGA  TAAATGTGAA AAGTAAATTT CCGGTCCTGA AGGATATAAA TCATGGATTT TCAATTCTCC TACCATTTTC TGATTACGAA ACGACTAAGC TCTTTTATCT ATATAATATA TATATTAAAA  ATTTTACTCG CTCTTTCTAA AAAAGAAAGT TTATCAATTT CTTATTTACT GTCATCACAT GCAAGTAAAT GGGACTGTTT TTTTTTTTTT CGTCAGAAAG TAAATGGGAC TTGAACATCG  AATTTAGTGG TTGTTTATCA AAATAACAAT ATTTCTTGAA ACAAATATGC TCAAAATATT TTTTTTTCTG GTTTATTTTT TTTATATGCA GTTCCTTTTA CCATATTTGG ATTGATTAAA  AAAATATTAC AAGAAAAGTT GAAAACAGAT GTGATAAAAG ATTTATATCA GACGTAAACA AAAGAAAAAA TCAACTTAAA ATCGAATGCC ATAAGTTGAT GAAACGAATA TTGTTTCATA  TTCGTGATTA TCTGAATTAC ATTCAATAAT TGTTGTAGGT TTCACTTATT TTTATTTTTC CTCCCTTTTA ACTTACATTG GACAATTTTT ATATTTTAAG GGAATCCCAC ATGGTGAGTA  ACCATGGGCT TATCTTCTCA GATTTCCCTT TCCAAATCTC CTATAGGAAT TTTATAAAGT TTATGGCTTG TATATTTTAC ATTTTATTAT CTAAAGTTTT AGAAAGGACA AAAAAATATT  TTTAATATTA AATGGAAACA TCATAAGTGA TATATACACA CGCGCACACA CTCGAACAAA GTAATCACTA ATCAGAATAA GAAGAGAAGT TAAATTAATT TACTAATTAA TTAAGTATAC  TACATATCTG GGCCATCAGG TGGCCACACA ATTGGGGTCG GGCACTGCAA CTCCTTCAGC AAGAGGCTCT ACAACTTCAT CGGCAAAGGT GGCAAAGGCG ACCAAGACCC TTCCCTGAAC  CCGACCTATG CCTCTCAACT GAAGGCCCGA TGCAAGACGC TCTCCGATAC CACCACCATC GTCGCGATGG ACCCCGGAAG CCCCCTCTCC TTCGACAACC ACTACTACAC GGCCTTGAAC  CAAAACCAAG GCCTCTTCCA GTCCGACGCC GCGCTCCTGA CCAACAAGGA GTCAAGCAAG ATCGTGAACA AGTTGCTGGA CCAGGACCGC TTCTTCACCG AGTTCGGCCA GTCGATGAAG 
CGGATGGGCA CGGTCCAAGT GCTCACCGGG AGCAACGGCG AGATCCGGAA GAAATGTAAT GTGATTAATT AG 

Retrieve as FASTA