Entry information : PtaPrx17
Entry ID 807
Creation 2005-12-26 (Christophe Dunand)
Last sequence changes 2014-08-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2014-08-19 (Christophe Dunand)
Peroxidase information: PtaPrx17
Name PtaPrx17
Class Class III peroxidase     [Orthogroup: Prx019]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Embryos
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx17
start..stop
S start..stop
PgPrx17 455 9e-164 1..242 1..242
PsiPrx17 432 1e-154 17..242 2..227
GbPrx17 367 3e-129 10..242 17..245
CmichPrx03 346 5e-121 12..242 9..234
Literature and cross-references PtaPrx17
Literature Cordonnier-Pratt,M.-M. et al., unpublished
EST ref. GenBank:   DR683943.1 [5' end]   DT631954.1 [5' end]
Cluster/Prediction ref. UniGene:   Pta.22359
Protein sequence: PtaPrx17
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   242 (219)
PWM (Da):   %s   26459.55 (23818.0)  
PI (pH):   %s   5.7 (5.09) Peptide Signal:   %s   cut: 24 range:24-242
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVFASQMIK LLLLPLLFVF LRPSYLDLKA AEAELHRGFY KNSCPEAESL VTSVLEKAIQ RNPRNAASVM RLQFHDCFVN GCDGSVLLDD TPTMVGEKTA LSNINSLRAF DVIDEIKNAL  EEACPNTVSC ADIIIIAARD AVVLTGGPSW EVFLGRKDSL TASLEDSNDI MPSPRDNATA LIQLFKRFGL SVKDLVALSG SHTIGKARCF SIVHRLYNQS GTGQADPTME LTYKEYLQKL 
CP 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. 3' end is missing.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGTAT TTGCAAGCCA AATGATCAAA CTGCTGCTCT TGCCTCTGCT GTTTGTATTC TTGAGGCCCT CGTATCTGGA TTTGAAAGCA GCAGAAGCCG AACTGCACCG TGGGTTTTAC  AAAAACAGCT GTCCAGAGGC AGAGTCTCTG GTAACCTCTG TACTCGAGAA AGCCATTCAA AGAAACCCCA GAAATGCTGC TTCAGTCATG CGCCTCCAAT TTCATGATTG CTTTGTTAAT  GGTTGTGATG GGTCGGTGCT GTTGGATGAC ACTCCTACGA TGGTGGGAGA GAAAACTGCT CTCTCCAACA TAAATTCTCT GCGGGCCTTC GATGTAATTG ATGAAATCAA GAACGCATTG  GAGGAGGCGT GCCCCAACAC TGTTTCTTGC GCGGACATCA TCATCATAGC AGCAAGGGAT GCCGTCGTTC TGACTGGTGG ACCTTCGTGG GAAGTGTTTT TGGGCAGAAA AGACAGCCTG  ACTGCCAGCC TTGAGGATTC GAACGATATA ATGCCCAGTC CTCGAGACAA CGCCACAGCT CTCATCCAAC TATTCAAACG CTTCGGCCTC TCTGTCAAAG ATTTGGTGGC TCTCTCGGGC 
TCTCACACGA TTGGGAAAGC ACGGTGCTTT TCCATAGTC 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGCCGGGGA TGGTATTGTC ACTGGTGGAC TGGAATTAAG GGAGCACGCC GCCTGAGCAA AACCCCCTGC TTACTCTACT CAAATGCCCG GTACACGTCC ACGGACAGGT TGCCAACGCG  TGTGACTGCA GGGAATCATC TAGTTTCTTA CTGTTGCTGT TAAAATCATG GCTGTATTTG CAAGCCAAAT GATCAAACTG CTGCTCTTGC CTCTGCTGTT TGTATTCTTG AGGCCCTCGT  ATCTGGATTT GAAAGCAGCA GAAGCCGAAC TGCACCGTGG GTTTTACAAA AACAGCTGTC CAGAGGCAGA GTCTCTGGTA ACCTCTGTAC TCGAGAAAGC CATTCAAAGA AACCCCAGAA  ATGCTGCTTC AGTCATGCGC CTCCAATTTC ATGATTGCTT TGTTAATGGT TGTGATGGGT CGGTGCTGTT GGATGACACT CCTACGATGG TGGGAGAGAA AACTGCTCTC TCCAACATAA  ATTCTCTGCG GGCCTTCGAT GTAATTGATG AAATCAAGAA CGCATTGGAG GAGGCGTGCC CCAACACTGT TTCTTGCGCG GACATCATCA TCATAGCAGC AAGGGATGCC GTCGTTCTGA  CTGGTGGACC TTCGTGGGAA GTGTTTTTGG GCAGAAAAGA CAGCCTGACT GCCAGCCTTG AGGATTCGAA CGATATAATG CCCAGTCCTC GAGACAACGC CACAGCTCTC ATCCAACTAT 
TCAAACGCTT CGGCCTCTCT GTCAAAGATT TGGTGGCTCT CTCGGGCTCT CACACGATTG GGAAAGCACG GTGCTTTTCC ATAGTCC 

Retrieve as FASTA