Entry information : EgrPrx176(Eucgr.L01603 / Egrandis_v1_0.023548m)
Entry ID 8078
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-28 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-01-28 (Christophe Dunand)
Peroxidase information: EgrPrx176(Eucgr.L01603 / Egrandis_v1_0.023548m)
Name EgrPrx176(Eucgr.L01603 / Egrandis_v1_0.023548m)
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx176
start..stop
S start..stop
EcamPrx176 595 0 1..289 13..301
EcamPrx58 543 0 1..289 13..304
MePrx88 463 1e-166 7..289 13..295
EglPrx176 459 8e-166 58..289 38..269
Literature and cross-references EgrPrx176(Eucgr.L01603 / Egrandis_v1_0.023548m)
DNA ref. Phytozome 12:   scaffold_282 (47886..50063)
Protein sequence: EgrPrx176(Eucgr.L01603 / Egrandis_v1_0.023548m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289
PWM (Da):   %s   31706.76  
PI (pH):   %s   6.31
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VVFFGHIGDS EGGDLRKNFY KSACPLAEEI VKDITWKHAA SNSALPAKFL RMHFHDCFVR GCDGSVLLDS TTNNKAEKVA VPNQSLTGFD VIDEIKEKLE ETCPGVVSCA DILALAARDS  VSFQFKKSMW EVLTGRRDGR ISRESEALSN IPSPFFNFTT LKQSFANKSL TLHDLVVLSG GHTIGVGHCN FFSNRLYNFT GKGDQDPSLD PTYASQLKAQ CKTLSDNATT VAMDPGSPLS 
FDSHYYKAVN RKQGLFQSDA ALLTNLESRK IVNELLDQDG FFTEFGQSM 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from Phytozome (First exon is missing (DNA contains n). Frame shift in the exon 3). No EST.
join(47886..48005,48050..48241,48856..49021,49661..50063).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGTCTTCT TTGGGCACAT AGGAGACTCA GAAGGAGGGG ACTTGAGGAA GAATTTCTAC AAGAGCGCAT GTCCTCTTGC TGAGGAAATA GTGAAGGATA TCACGTGGAA GCATGCCGCC  AGTAACTCAG CTTTGCCCGC CAAGTTCTTG AGGATGCATT TCCACGATTG CTTCGTTAGG GTACGCACGT GTATATACAC TATAATCATC CATGCATTGG AGTAGATTAA TCCCGACACT  ATGCCTATGC TGGAACTTTT ATTAGGCTTG CATTTGCACA CGCACCGGCC GGCGAACTCG CCTTGTGCAT GAACTACCGT CGTTTGTCAG TGTCATCTAT ATATATAAAG TACCGTCGTT  TGGCCGTGTC ATATATATAC ATACACGAGT CTCTTGCTAT GTCTAGATTG AACCAAGAAC TGATATTCTT TAGAAGAATC ATTTCATTGT TCCATATGGT CGCACAAGGT AAAAAATCGA  TGCTTACGTG CATCATTGTA GAAGGAGAGT TTTGCGTGGT AATATTCTTT GGTGCTTGAT CGCATCGTTT CATGTGTGTA GGGTTGCGAT GGCTCAGTTT TGCTAGACTC GACGACGAAC  AACAAGGCGG AGAAGGTGGC GGTTCCGAAC CAGTCGCTAA CCGGGTTCGA CGTAATAGAC GAGATCAAGG AGAAGCTGGA GGAAACATGC CCTGGGGTCG TCTCTTGTGC CGACATCCTG  GCTTTAGCTG CTAGAGACTC GGTCTCTTTC CAAGTAAGAC TTTTCGGGTG ATGAAAAACT CTAGGGCCAT TCATTGGCAT TCTCTTGGGT TTGTTTTGAA AACTTTTCTT CATGnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnAGTTC AATAAGGTCG ATCGATTTGA GAAACAAACG TACCTCTTTT TCTTTTTGTT TTTTCCCAAA TTAAAGTTTT CTCTTGTTTC  TGGTTGTTGA AAATTCCCAC TAATAATGTG CAAATCTCTC ACAACAAAGG TGATCCCGAT ATTGGTCGGC AGCTTCTATA TATATCGTGT ATTTATATTA TGATTTACAT TAATTTGAAG  TTTTAGTGGA TCTCACATGA TTGCAACAAT TAATTGTGAT TTGCAGTTCA AAAAGTCGAT GTGGGAGGTG TTGACTGGAA GAAGAGATGG GAGAATTTCA CGTGAATCAG AAGCGCTTTC  CAATATCCCT TCCCCATTCT TCAACTTTAC AACTCTCAAG CAATCTTTTG CCAACAAGAG CCTCACTCTT CACGACCTTG TTGTCTTATC AGGTAAATCA AATATAAAAG AAATTTCACA  TTTTAGAGGG TCAAAATTAG CCATGTGCTC GTAGGACCTA ATGTCCAGTA AGTCAATTTC CCTTTTCAGG TCATTTATTT CTTTTTCTTT TTGTGTGTGT ATGTGTGTGA ATATTTTCGT  AAGAATACAC ATGAATTGTA TCGGATTCTC TCTCTGAAAT ATCTAATGAA ATACCCATTG CTCGTTCCTG AAAAGGGAAA CAAATTGATT AATGTGCTTA TTATCTTCTC AAATATCCCT  TAACATATGT CCTTAGGAAT TATATGAAAA GCATAGGTAA ACAATTTTCC CTAATGACGG TGAACAAATG GAAACTCATA GCCCCATACA TATATAGAGA GAATCTGAAG GTCCGATTAT  TATGAATTGT ATATTTTGCA ATTTTTCTAA AATTTTAAAA ACGACAAAAA TATATCTTTA ATGTTAAATG AAAAAATCAT AAACGATATA CATATATATT ATAATGTTTA TACTTTTTTG  GAAAGTTCTC AAGCACTCGA CTTGGAAAAA AAGGGTCAAC TTTCAAACTT TATAAGAAAA GGAAAATTCA ATCTTCTAAG AAGCAAAGTT GAATGAATTA ATTAAGTACA CGACATGTCT  GGGTCATCAG GTGGGCACAC GATTGGGGTC GGGCACTGCA ACTTCTTCAG CAACAGGCTC TACAACTTCA CCGGAAAAGG CGACCAAGAC CCGTCCCTCG ACCCGACCTA CGCCTCTCAA  CTGAAGGCTC AATGCAAGAC GCTCTCCGAC AACGCCACCA CTGTCGCGAT GGACCCCGGA AGCCCCCTCT CCTTCGACAG CCACTACTAC AAGGCCGTGA ACCGAAAGCA GGGCCTCTTC 
CAGTCCGACG CCGCGCTCCT GACCAACTTG GAGTCGAGGA AGATCGTCAA CGAGTTGCTG GACCAGGATG GCTTCTTCAC CGAGTTCGGC CAGTCGATG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGTCTTCT TTGGGCACAT AGGAGACTCA GAAGGAGGGG ACTTGAGGAA GAATTTCTAC AAGAGCGCAT GTCCTCTTGC TGAGGAAATA GTGAAGGATA TCACGTGGAA GCATGCCGCC  AGTAACTCAG CTTTGCCCGC CAAGTTCTTG AGGATGCATT TCCACGATTG CTTCGTTAGG GGTTGCGATG GCTCAGTTTT GCTAGACTCG ACGACGAACA ACAAGGCGGA GAAGGTGGCG  GTTCCGAACC AGTCGCTAAC CGGGTTCGAC GTAATAGACG AGATCAAGGA GAAGCTGGAG GAAACATGCC CTGGGGTCGT CTCTTGTGCC GACATCCTGG CTTTAGCTGC TAGAGACTCG  GTCTCTTTCC AATTCAAAAA GTCGATGTGG GAGGTGTTGA CTGGAAGAAG AGATGGGAGA ATTTCACGTG AATCAGAAGC GCTTTCCAAT ATCCCTTCCC CATTCTTCAA CTTTACAACT  CTCAAGCAAT CTTTTGCCAA CAAGAGCCTC ACTCTTCACG ACCTTGTTGT CTTATCAGGT GGGCACACGA TTGGGGTCGG GCACTGCAAC TTCTTCAGCA ACAGGCTCTA CAACTTCACC  GGAAAAGGCG ACCAAGACCC GTCCCTCGAC CCGACCTACG CCTCTCAACT GAAGGCTCAA TGCAAGACGC TCTCCGACAA CGCCACCACT GTCGCGATGG ACCCCGGAAG CCCCCTCTCC  TTCGACAGCC ACTACTACAA GGCCGTGAAC CGAAAGCAGG GCCTCTTCCA GTCCGACGCC GCGCTCCTGA CCAACTTGGA GTCGAGGAAG ATCGTCAACG AGTTGCTGGA CCAGGATGGC 
TTCTTCACCG AGTTCGGCCA GTCGATG 

Retrieve as FASTA