Entry information : EgrPrx[P]10 ( Eucgr.A00296 / Egrandis_v1_0.053401m)
Entry ID 8091
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2016-03-22 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-03-22 (Achraf Jemmat)
Peroxidase information: EgrPrx[P]10 ( Eucgr.A00296 / Egrandis_v1_0.053401m)
Name (synonym) EgrPrx[P]10 ( Eucgr.A00296 / Egrandis_v1_0.053401m)
Class Class III peroxidase     [Orthogroup: Prx092]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]10
start..stop
S start..stop
EglPrx[P]10 566 0 3..307 22..327
EcamPrx[P]10 561 0 4..307 32..336
EgrPrx09 504 0 3..307 30..334
EglPrx09 497 2e-179 3..307 30..335
Literature and cross-references EgrPrx[P]10 ( Eucgr.A00296 / Egrandis_v1_0.053401m)
DNA ref. Phytozome 12:   scaffold_1 (3792160..3793705)
Protein sequence: EgrPrx[P]10 ( Eucgr.A00296 / Egrandis_v1_0.053401m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307
PWM (Da):   %s   33970.82  
PI (pH):   %s   7.43
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GSGIEPPQKL QWHYYRNSCR DAERYVSTQV EFYWKLDRSL APKPIRMLYA DCFVTGCDAL ILSDRPYSEK TAPQNADLLG FPMAVMDKIK QVLEQHCPGV VCCADILNFA ARDAAHLAGG  LSYPVLAGRR DGMSSSVASV DLPLGAHPWG SVLAYFESRG LDVLDLVTLL GGHSMGKTSC SFIADRLYNF NKIGKPDPSM DSSFLAQMRE QGPPNSKNQL YLDPDSGSSY SFSKSFYSGV 
LNHRVVLGID QQITANNDSS QIAEEFNASF EDFRKMFALS MSRMGNIKVL PGKQGEIRKN YRVVNGK* 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (Short 5'end is missing; PS is missing due to undetermined nucleotides, frame shift around VALS). Incorrect prediction from Phytozome (PS and stop are missing). No EST. Containing motif 'YADC'.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCAGTGGCA TTGAGCCGCC ACAGAAGCTG CAGTGGCATT ACTACCGGAA CTCGTGCCGC GACGCCGAGA GGTACGTTAG CACCCAGGTC GAGTTCTACT GGAAGCTGGA CAGGAGCCTC  GCGCCTAAGC CCATCCGAAT GCTCTATGCC GACTGCTTCG TCACGGTACA TTTCTTATCC TCTCTCGAAC GATCTATCAG TCCGCATCAC TTCAATATCA AGTTTTCATC GCCCTTCTAA  GCGCGTGATA TCCTTTCACC CAACGGTTTA ACCTCTTGAA CCAGGCTTTC TTACATACCA CTCTTGTGTA CATATATATA AAACAAAGCC TTGGACTCAG ATATGTTTGG TTATGCATAC  AAAACAGGGG TGCGATGCGT TGATTCTATC AGACCGGCCA TATTCAGAGA AAACAGCACC GCAAAATGCA GATCTTCTAG GGTTTCCTAT GGCGGTGATG GACAAGATCA AGCAAGTCCT  GGAACAACAT TGTCCAGGAG TCGTCTGTTG TGCTGACATA CTCAACTTTG CCGCTAGAGA TGCTGCTCAC TTGGTATGTA CCTGGTTTGC ACTTCTCTCT TTTGGCTTGA AAAGACGTTT  TCGCTGCATT GGTTATTGAC ATGCTGTTAG CTTGAGCTTG TAGGGTTAGA TGTGGAAAAT TAGCAGTGCT GATGTGATAA TAATGTTGAA ATAGGCGGGA GGGCTGTCGT ACCCTGTTCT  AGCGGGGAGG AGGGACGGGA TGTCGTCCTC CGTGGCGTCG GTGGACCTCC CATTGGGGGC CACCCTTGGG GATCGGTGCT CGCTTACTTC GAATCAAGAG GCTTGGATGT GCTGGATCTT  GTTACTCTAC TCGGTACGAT CGACCCTCAT GTGAAAACGT ATTTATTTGA CTTGTGACCT CATTAAATTA CCTTAGATCT TAGCAATTCC TTTTCGATTT TAATTTTTCG AAATCTCCAT  CTAATTGTTG GGATACATAG AATTTTATCA TATATAGGAT AGTCGAGAAT ATAATCCGAA CTGATCCTCC TAATGATACC TCCAAGTGCA CGAAGCAACA TGTTTATGTA CTATGTCATA  TCTCAAAATC AGAACCAATT CCTAACTTGC CAAAACAATG TAAACTTTGC AAGGAGGGCA TTCAATGGGC AAGACCAGCT GCAGCTTCAT CGCGGACCGG CTGTACAATT TCAACAAAAT  TGGCAAGCCA GACCCAAGCA TGGACTCATC CTTCTTGGCC CAGATGAGGG AGCAAGGCCC ACCGAACTCA AAGAATCAAC TGTACCTTGA CCCTGATTCA GGTTCCAGCT ACAGCTTCAG  CAAGTCATTC TACTCCGGGG TCCTGAACCA CCGTGTCGTC CTCGGCATCG ACCAGCAGAT CACCGCCAAC AATGACAGCT CCCAGATCGC TGAGGAGTTC AATGCCAGTT TTGAGGACTT 
CCGGAAGATG TTCGCCCTAT CGATGAGCCG GATGGGGAAC ATCAAGGTCT TGCCGGGGAA GCAGGGGGAG ATTCGCAAGA ATTACCGAGT CGTGAACGGG AAGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCAGTGGCA TTGAGCCGCC ACAGAAGCTG CAGTGGCATT ACTACCGGAA CTCGTGCCGC GACGCCGAGA GGTACGTTAG CACCCAGGTC GAGTTCTACT GGAAGCTGGA CAGGAGCCTC  GCGCCTAAGC CCATCCGAAT GCTCTATGCC GACTGCTTCG TCACGGGGTG CGATGCGTTG ATTCTATCAG ACCGGCCATA TTCAGAGAAA ACAGCACCGC AAAATGCAGA TCTTCTAGGG  TTTCCTATGG CGGTGATGGA CAAGATCAAG CAAGTCCTGG AACAACATTG TCCAGGAGTC GTCTGTTGTG CTGACATACT CAACTTTGCC GCTAGAGATG CTGCTCACTT GGCGGGAGGG  CTGTCGTACC CTGTTCTAGC GGGGAGGAGG GACGGGATGT CGTCCTCCGT GGCGTCGGTG GACCTCCCAT TGGGGGCCCA CCCTTGGGGA TCGGTGCTCG CTTACTTCGA ATCAAGAGGC  TTGGATGTGC TGGATCTTGT TACTCTACTC GGAGGGCATT CAATGGGCAA GACCAGCTGC AGCTTCATCG CGGACCGGCT GTACAATTTC AACAAAATTG GCAAGCCAGA CCCAAGCATG  GACTCATCCT TCTTGGCCCA GATGAGGGAG CAAGGCCCAC CGAACTCAAA GAATCAACTG TACCTTGACC CTGATTCAGG TTCCAGCTAC AGCTTCAGCA AGTCATTCTA CTCCGGGGTC  CTGAACCACC GTGTCGTCCT CGGCATCGAC CAGCAGATCA CCGCCAACAA TGACAGCTCC CAGATCGCTG AGGAGTTCAA TGCCAGTTTT GAGGACTTCC GGAAGATGTT CGCCCTATCG 
ATGAGCCGGA TGGGGAACAT CAAGGTCTTG CCGGGGAAGC AGGGGGAGAT TCGCAAGAAT TACCGAGTCG TGAACGGGAA GTAA 

Retrieve as FASTA