Entry information : EgrPrx[P]11 ( Eucgr.A00297 / Egrandis_v1_0.044842m)
Entry ID 8108
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-06-25 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EgrPrx[P]11 ( Eucgr.A00297 / Egrandis_v1_0.044842m)
Name (synonym) EgrPrx[P]11 ( Eucgr.A00297 / Egrandis_v1_0.044842m)
Class Class III peroxidase     [Orthogroup: Prx046]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]11
start..stop
S start..stop
EgrPrx[P]06 591 0 1..327 1..332
EglPrx[P]06 518 0 1..327 1..307
EguPrx12 443 8e-158 1..327 1..334
EgrPrx12 442 2e-157 1..327 1..334
Literature and cross-references EgrPrx[P]11 ( Eucgr.A00297 / Egrandis_v1_0.044842m)
DNA ref. Phytozome 12:   scaffold_1 (3796441..3800093)
Protein sequence: EgrPrx[P]11 ( Eucgr.A00297 / Egrandis_v1_0.044842m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (305)
PWM (Da):   %s   36020.05 (33952.9)  
PI (pH):   %s   6.5 (6.12) Peptide Signal:   %s   cut: 20 range:20-324
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTPSRLWQLL LSALALVSSC QVQHNANAAE TMDPPQKLQW LYYQNSCPDA EKYVRDQVEF YWKQDRTLAL KLIRLLYSDC FITGCNASIL LDAPIQNAAL LGLPMEMIDK VKEVLEQHFP  GDFSCTDIIN LAAKDAVVLV GGTSYPIPTG RRDGNSSSAK SVDLLPL*AI PWKAVPGYFK SKGLNVLFLT TLRGTNCRxC SFIPDRLYDF NKTGEPDPSM DPTFLSQLRE QCPPNSTNLA 
YLNPDLGSSY SFGNSFYSRV RHHQAVLGIN QQIASNFDSS LIAWEYDVRF GDFQKMFGMS TIRMGNIKLL PEDQG*IRKN C*VVDGK 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from Phytozome (some stops in frame, frame shift exon 2). No EST. Containing motif 'YSDC'.
join(3796441..3796698,3796897..3797025,3797176..3797244,3799275..3799370,3799676..3800093).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACACCAT CAAGGTTGTG GCAGTTGTTG CTATCGGCGC TCGCGTTGGT GAGCTCATGC CAGGTGCAGC ACAATGCCAA CGCGGCAGAG ACAATGGATC CGCCGCAGAA GCTGCAATGG  CTTTACTACC AGAACTCATG CCCTGACGCT GAGAAGTACG TGAGGGACCA GGTCGAGTTC TACTGGAAGC AGGACAGGAC CCTTGCTCTC AAGCTCATCC GACTACTCTA CTCCGACTGC  TTCATCACCT TATGTATCGT CTGTTTTTTT CCCCCTCTCT TGGACGATCT TGAAATCCGT ATCGCTTCAA TATCAAGTTT CCATCGCCTT TCTATGCTCG TGATATCATT TCGCCTAAGG  GTTTAAACCT CTCGAACAGG GCTTTCTAAC GTACCACTCT TTTGTGTATA AAACTGGGGT GCAATGCGTC AATTCTATTG GACGCGCCAG ATTCAGAATG CAGCGCTTCT AGGGCTTCCT  ATGGAGATGA TTGACAAGGT CAAGGAAGTC CTGGAACAGC ATTTTCCTGG GGACTTCTCT TGCACCGACA TAATCAACCT CGCTGCTAAA GATGCTGTTG TCTTGGTATG CATCATGGTT  CGCAGTTTTT CCCTTTTGGG CGTGAAAAAA GATCGTTTAG GCTGCTCCAC TAATAATTGA CATGCTATTA GCTTGAGTTC TAGAGCGTTC GATATGGAGA AAAATTAGAA TTATGCGATA  ATAATGCAGT AACAGGTGGG AGGGACGTCG TACCCCATTC CAACGGGGAG GAGGGACGGG AATTCATCCT CCGCGAAGTC GGTGGACCTC TTCTTTAGGC CCTATTTGGA AATGGGCCAA  ATAGTAAAAA AATTTATTCT TTTGTTTCCG GGAGTAGTTT TGGAATAAAA TCATGTTTGG TAAAAATTTT GTTTCTGGGA ACAAATTTCT ATTTTTTTTT CCCAAAAGTA GATTTGAAAC  AGAATCAAGA ATAAAATAAA ATAAAATAAA TCGATTCTTG TTCTAGGAAC AATTCTATAA TTAAGCCCAT ATTTTCTCTT TTTATTTTCT TTTTCTTGTT CTTCTTCCAT TTTCTTCTTC  TTCATCTACT GCCATTGCTG CCGCCGTCGC CACTATTGTT CGGCGCCTAC CATCGCCGAT TGCTGACAAC TAGTCCGATG AGCTCAGCCA TCGGCGAGGA GGGCGAGGCT TACCCAGCCC  CGACTACGTT TGACCTTGCC GGGCCACCGC AAGGTCGGCC TCGCCTAGGG TGGTGGGCTT CACAGTGCTG AGATGGGTTC TGGAAGGTGA TTATGGGGAA GCTGACCCCC ATTAGGGTTC  CGAGGGTGGT GCTCCAATCA TGGAAGAAAG AACCTGTGGG CTTCCCCTGC CATTCGCACG AAGCATAAGT AGAGCATAAC TACAGCACGA TGACGATGGC TTGCTTCTCT ATCTACTCTC  ACCTCCCCTC ACCGTGTCCT CCTCCTCCAA GCAAGGCCGA CCTCGTGGGG ACCCAGCAAA GTCGAGCCCC ACGGGCGACT AGGCGAGCTC GTCCTCACCA GATTTGGGCA AGGTCACTCG  CCTAGCCATG GCTCGGCCGG GCCTCACCCA CTTGCAGACG AGGCTCGGCC GACGAGTGCC GGTGACGCTT CGGTGAGGTC GTCGGTCCTC GTCTGGCTGT TCGTCGGTCA TCCTAAGGTC  GGCAATCGGC CACTTGAAGA AGAAGAATAG GAGAAAGAAA GGGGAAAAAA AAGAAAAAAG TAATAAAATT ATTTAAAAAT TAAAATAAAA TGATTTGAAG TAGAAATTTT GAGCACGGTA  CGAAACGCAA TTCTATTATG TGAATTGAAA TTTTTTTATA GTTACCAAAC AGCTTAAAAT ACTTAGAAAT TGTTCCCGGG AACAGAAACG TTACTAAACA CACTCTTAGA GTGGGTCTTA  GACCCATATA TGACCCATTT AAATCATAAA TGGACCATAT ATGGATCACT TATTTTTTGA AGAAACAAGT TAAATGGATT TAAAAATTGA AGGCTTAAGA TAAATGGGTT TTAAATAGGT  CTTAAATGGG TTGGACTTAG AACTCATTTT CAACCAAAAC CTCACAATCT CCATCTTTCC TCTTTAACTT TACGAAAATA TTTTTAAATA AAGATCGAAA TTATAATTAT TTTTTATACT  TTAATTTTCT TTTTCTTTTT TTAATTTCCT TTTTTCTTTC CTTCTTCCTC CTTCTTTAGC CGGTGGCTGG CATGGTGACC GGCCAAGTGA GGCTCGAGCT CAATGGCCTT AGGCATGGCT  CAAGCTTTGC CAGATCCAGT GATGGGTGAG CTCTAACCTC GCCAAATCGG CGAGCCCTCG AGCTCGTCGA TGTCAAGCGA GGCTTATCGA GCGAACCGGA TGAGCTTTTA AGGCTTGCCT  GTGGCTGGTT GCCAGCTATC GTCGTGGTTG ACGATCAGCC ATAGAAGAAG AAAAACAAAA AAGAAAAAAG AAAAGAGAAA AGGAAAATTA GAAATTATAT TCTTCAAAAA TAAAAAATAA  TTCTTTACCA AAAAAAATAA AAATAAAAAA TAAAAAATAA TTAAAAATTC GATTTTCTAA AATAATAAAT TCTTAAAAAA TATAAAAATT GTCCATTAAA TTTATAATTG ATAAAATTAT  TTTAGCAATA CCATTTTTTA AAAAATAATG AAAAATAAGT TTTCTTAAGT TTAGTTAAAT GGGTCGGATA TGGGTTGAAT ATGAGTTGGG TCAGGTATGG GTAAAAGAAT TTGCACTACA  ATAAATCGGT CATAAACAGG TTAAATGGGT CGAATTGGGT CGGACCATTT ATGACCCGAC CCACCCGTTT AACGGATCTA CTCCCATTGT AGGCCATCCC ATGGAAAGCG GTGCCCGGTT  ACTTCAAATC AAAGGGTTTG AATGTGCTGT TCCTCACTAC TCTACGCGGT ATCATCTGAC CCTCACAAAT TTGACCGGGA CTTCATTATA TCACCTCAGA TCTTAACCAA TCCAAGCAAA  TTGTTTAGTT TAGTGGATCG CGACGTCTTT TTTCGCTTTT AAGTTTTGTA AGTCGCTGCC TAATTGTCAC GATACAAAGA ATTTTATCAT AAATAGAATT GTCGAGGATA TAATCTGAGC  CTCAATCCTC ACAATGATCT CCTCCCAGTG CACAAAATGG CAATGCTCAC GTATTATGTC AATCTCAGAA TCATAGCCAA AATCCTAACT TGCCAAAACA ATTTAAATTT TTCCCGGGGG  GCATTCACTG GGCAAGACCA ATTGCAGGCn nTGTAGCTTC ATCCCGGACA GGTTGTACGA TTTCAACAAA ACTGGCGAGC CAGACCCAAG CATGGACCCA ACCTTCTTGT CCCAATTGAG  GGAGCAATGC CCTCCGAACT CAACGAATCT AGCGTACCTC AACCCTGACT TAGGCTCGAG CTACAGCTTC GGCAATTCCT TCTACTCAAG GGTACGGCAC CACCAGGCGG TCCTCGGCAT  CAACCAGCAG ATCGCTAGCA ACTTCGACAG CTCCCTGATC GCTTGGGAGT ATGATGTCAG ATTCGGGGAC TTCCAGAAGA TGTTCGGCAT GTCAACAATC CGGATGGGGA ACATCAAGCT 
CCTACCGGAG GATCAGGGGT AGATTCGCAA GAATTGCTGA GTCGTGGACG GGAAA 

Retrieve as FASTA