Entry information : EgrPrx13 (Eucgr.A00299 / Egrandis_v1_0.018809m)
Entry ID 8111
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2011-02-07 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrPrx13 (Eucgr.A00299 / Egrandis_v1_0.018809m)
Name (synonym) EgrPrx13 (Eucgr.A00299 / Egrandis_v1_0.018809m)
Class Class III peroxidase    [Orthogroup: Prx057]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx13
start..stop
S start..stop
EgrPrx04 686 0 1..334 1..334
EguPrx04 664 0 1..334 1..334
EcamPrx04 656 0 5..334 1..330
EglPrx13 615 0 1..334 1..313
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3822006..3822251 246 N° 2 3822451..3822636 186 N° 3 3822770..3822929 160 N° 4 3823224..3823636 413
join(3822006..3822251,3822451..3822636,3822770..3822929,3823224..3823636)


exon

Literature and cross-references EgrPrx13 (Eucgr.A00299 / Egrandis_v1_0.018809m)
DNA ref. Phytozome 11:   scaffold_1 (3822006..3823636)
Protein sequence: EgrPrx13 (Eucgr.A00299 / Egrandis_v1_0.018809m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335
PWM (Da):   %s   37541.91  
PI (pH):   %s   6.17
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRASMWWQLLLSTLALVSSCAVWHVEAEATIELPPPLQWHFYQNSCPDVERYVRDQVEFYWKQDSTLAVKLIQLLYTDCFIKGCDASILLDGPDTEKTAPQNAPILGFPLEAIDKVKEVLEQHCPGVVSCADIINLAARDAVVLAGGVSYPVPTGRRDGNSSSAKLVDIAVHATPWEKVIHYFEVRGMNVFDVTTLLGGHTLGRTRCKFIAERLYDFNNTGKPDPSMDPSFLAELRVQCPPNSTNSVYLNPDSGSSNRFGKTFYSRVLNHRAVLSIDQQIADREESLQIARRYDANFEDFLKMFGYAMTKLGNTWLLPGDQGEIRKNCRVVNRK

Retrieve as FASTA  
Remarks Complete sequence from genomic. ALT transcript: Egrandis_v1_0.023803m (exons, 2, 3 and 4). Containing motif 'YTDC'. Correct prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAGCATCAATGTGGTGGCAGCTGTTGCTATCGACGCTCGCGTTGGTGAGCTCGTGCGCGGTGTGGCACGTTGAGGCCGAGGCGACGATCGAGCTGCCGCCGCCGCTGCAGTGGCAT
TTCTACCAGAACTCATGCCCCGACGTCGAGAGGTATGTGAGGGACCAGGTCGAGTTCTACTGGAAGCAGGACAGCACCCTCGCCGTCAAGCTCATCCAACTTCTCTACACTGACTGCTTC
ATCAAG
GTACGTACCGTCTGCTCATTTCCCTCTCTCTCTCTCTCTCTCAAACGATCTCAAAGTCAGCATCGCTTCGATCATCGAGTTTCTGTCGCCCCTTCTGAGCATGCCATATACTTT
CACCCAATGGTTTAACCTCTCGGACTCGTCTTTCTAGCATACCAATCTTTTCTGAGCATATGTATGGTTTATGTGGATAAAAAAGGGATGCGATGCGTCGATTCTCTTGGACGGGCCAGA
CACAGAGAAAACAGCACCACAAAATGCACCGATCCTAGGTTTTCCTCTTGAGGCGATTGACAAGGTCAAGGAAGTTCTGGAACAGCACTGTCCCGGGGTCGTCTCTTGCGCCGACATTAT
CAACCTTGCCGCTAGAGACGCTGTCGTCTTG
GTATGCAACATGGTTCTCAGTTTTTCCTTTTTGGGCTGGAAAAGAGATATGCTGTTAGCTTGAGTTTTGGAGCGTTCGATATGGACAGA
AAAAAAAAATCAGAATTATTGATGTGATAATGATGTTGTAATAGGCGGGAGGAGTGTCGTACCCCGTTCCGACGGGGAGGAGGGACGGAAATTCGTCCAGTGCGAAGTTGGTGGACATCG
CAGTGCACGCCACCCCGTGGGAAAAGGTGATCCATTACTTCGAAGTAAGGGGCATGAATGTGTTCGACGTCACTACTCTACTTG
GTACGGTCTAACTCTCGAATGAAAAGTGTTTATTTG
ACTCCGACCTCATTACATTACCTTAATATCTTAACCAATTCAGGCAACTCATTTAATTCAGTGAATCAAGCTGTCCATTTAGCTTTCGCTAAGTCGAAGAATTTTATCAGATATAGAATT
GTCGAGGATGTAATCCGAAGCAATCCTCGTAATGATCTCCTCCAAGTGCACAAAAATGGCATGCTCACGTAATATATCAATCTCTCAATCATAACCAATTCCTCCTTACTTTGCCAAAAA
CAATTTAAATTTTGCCAGGGGGCCATACACTGGGCAGGACCAGATGCAAGTTCATCGCAGAAAGACTGTATGATTTCAACAACACTGGCAAGCCAGACCCAAGCATGGACCCATCCTTCT
TGGCCGAATTGAGGGTGCAATGCCCGCCCAACTCAACGAATTCAGTGTACCTTAACCCTGACTCAGGCTCGAGTAACAGGTTCGGCAAAACCTTCTACTCCAGGGTCCTGAACCACCGGG
CCGTCCTCAGCATCGATCAGCAGATCGCCGACCGTGAGGAGAGCCTCCAGATTGCCCGGCGGTACGATGCCAATTTTGAGGACTTCCTGAAGATGTTCGGCTATGCTATGACTAAGCTGG
GGAACACCTGGCTCCTGCCAGGGGATCAGGGTGAGATTCGCAAGAATTGCCGAGTCGTGAACAGGAAATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAGCATCAATGTGGTGGCAGCTGTTGCTATCGACGCTCGCGTTGGTGAGCTCGTGCGCGGTGTGGCACGTTGAGGCCGAGGCGACGATCGAGCTGCCGCCGCCGCTGCAGTGGCAT
TTCTACCAGAACTCATGCCCCGACGTCGAGAGGTATGTGAGGGACCAGGTCGAGTTCTACTGGAAGCAGGACAGCACCCTCGCCGTCAAGCTCATCCAACTTCTCTACACTGACTGCTTC
ATCAAG
GGATGCGATGCGTCGATTCTCTTGGACGGGCCAGACACAGAGAAAACAGCACCACAAAATGCACCGATCCTAGGTTTTCCTCTTGAGGCGATTGACAAGGTCAAGGAAGTTCTG
GAACAGCACTGTCCCGGGGTCGTCTCTTGCGCCGACATTATCAACCTTGCCGCTAGAGACGCTGTCGTCTTG
GCGGGAGGAGTGTCGTACCCCGTTCCGACGGGGAGGAGGGACGGAAAT
TCGTCCAGTGCGAAGTTGGTGGACATCGCAGTGCACGCCACCCCGTGGGAAAAGGTGATCCATTACTTCGAAGTAAGGGGCATGAATGTGTTCGACGTCACTACTCTACTTG
GGGGCCAT
ACACTGGGCAGGACCAGATGCAAGTTCATCGCAGAAAGACTGTATGATTTCAACAACACTGGCAAGCCAGACCCAAGCATGGACCCATCCTTCTTGGCCGAATTGAGGGTGCAATGCCCG
CCCAACTCAACGAATTCAGTGTACCTTAACCCTGACTCAGGCTCGAGTAACAGGTTCGGCAAAACCTTCTACTCCAGGGTCCTGAACCACCGGGCCGTCCTCAGCATCGATCAGCAGATC
GCCGACCGTGAGGAGAGCCTCCAGATTGCCCGGCGGTACGATGCCAATTTTGAGGACTTCCTGAAGATGTTCGGCTATGCTATGACTAAGCTGGGGAACACCTGGCTCCTGCCAGGGGAT
CAGGGTGAGATTCGCAAGAATTGCCGAGTCGTGAACAGGAAATAA

Retrieve as FASTA