Entry information : EgrPrx[P]34
Entry ID 8112
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2016-03-21 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-03-22 (Achraf Jemmat)
Peroxidase information: EgrPrx[P]34
Name EgrPrx[P]34
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]34
start..stop
S start..stop
EgrPrx[P]40 196 2e-66 1..123 1..131
EguPrx[P]34 192 3e-65 37..134 1..98
EglPrx32 194 4e-63 1..125 1..134
EgrPrx32 194 4e-63 1..125 1..134
Literature and cross-references EgrPrx[P]34
DNA ref. Phytozome 12:   scaffold_1 (11199866..11199446)
Protein sequence: EgrPrx[P]34
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   134 (111)
PWM (Da):   %s   14705.62 (12213.2)  
PI (pH):   %s   8.51 (8.23) Peptide Signal:   %s   cut: 24 range:24-134
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALGSLSLFR SLLFLSLTAS ALSTRPYNNG LSPPQASATI KRVIEAMVQQ ERRMGASLLR LHFHDCFGCD ALMLLDMTPT IDSEMLTLHN NNSARGFKVI GQIKAEANGV CRCPVVSCVD 
ILTITLMTLL LRYI* 

Retrieve as FASTA  
Remarks Pseudogene from genomic (part of exon 1 and exon 2). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTAG GTAGCCTCAG CCTCTTCCGA TCACTTCTCT TCTTGTCCCT CACGGCGTCG GCTCTCTCGA CACGCCCCTA CAACAACGGC CTTTCGCCCC TCACGGCGTC GGCTCTCTCG  ACACGCCCCT ACAACAACGG CCTTTCGCCC TCAGCCACCA TCAAGCGCGT CATTGAGGCG ATGGTGCAGC AAGAGCGACG CATGGGCGCG TCCTTGCTGC GCTTGCACTT CCATGACTGT  TTCGTCAATC GAAGACATAT ACAGCTAAAT TTCACATTAA TTTGTTGTTC TAAAAAATAG TGATTACTAT TTAGCATTGC ACAATACTTG CTAACATTGA TGTTTGTTTG GGAGTTTAAT  AATGCAGGGT TGTGATGCAT TGATGCTCTT GGATATGACC CCGACCATCG ACAGTGAAAT GCTTACGCTT CATAATAACA ATTCAGCTAG AGGGTTCAAA GTGATCGGCC AAATTAAGGC 
GGAGGCCAAC GGAGTATGTA GATGTCCGGT GGTATCTTGT GTGGACATCT TGACAATCAC TCTCATGACT CTGTTGTTGC GGTACATCTA G 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTAG GTAGCCTCAG CCTCTTCCGA TCACTTCTCT TCTTGTCCCT CACGGCGTCG GCTCTCTCGA CACGCCCCTA CAACAACGGC CTTTCGCCCC TCACGGCGTC GGCTCTCTCG  ACACGCCCCT ACAACAACGG CCTTTCGCCC TCAGCCACCA TCAAGCGCGT CATTGAGGCG ATGGTGCAGC AAGAGCGACG CATGGGCGCG TCCTTGCTGC GCTTGCACTT CCATGACTGT  TTCGGTTGTG ATGCATTGAT GCTCTTGGAT ATGACCCCGA CCATCGACAG TGAAATGCTT ACGCTTCATA ATAACAATTC AGCTAGAGGG TTCAAAGTGA TCGGCCAAAT TAAGGCGGAG 
GCCAACGGAG TATGTAGATG TCCGGTGGTA TCTTGTGTGG ACATCTTGAC AATCACTCTC ATGACTCTGT TGTTGCGGTA CATCTAG 

Retrieve as FASTA